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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181830218
OGUO01000993
24650
Bacillota
TAA
Leu
>WENV181830369
OGUO01002603
196621
Bacillota
GTC
Asp
>WENV181830691
OGUO01009049
155113
Bacillota
CGG
Pro
>WENV181830548
OGUO01005439
144612
Bacillota
TCT
Arg
>WENV181830524
OGUO01004912
267649
Bacillota
TAC
Val
>WENV181830071
OGUO01000363
339890
Bacillota
TTG
Gln
>WENV181830809
OGUO01012908
235098
Bacillota
GAC
Val
>WENV181830569
OGUO01005885
44854
Bacillota
TGA
Ser
>WENV181831040
OGUO01027613
235154
Bacillota
GTT
Asn
>WENV181830303
OGUO01001660
338147
Bacillota
CTC
Glu
>WENV181831013
OGUO01025464
235150
Bacillota
TGC
Ala
>WENV181830937
OGUO01019112
235137
Bacillota
TGC
Ala
>WENV181830053
OGUO01000334
340802
Bacillota
TTG
Gln
>WENV181830703
OGUO01009230
345329
Bacillota
TTC
Glu
>WENV181831242
OGUO01061003
237265
Bacillota
TAC
Val
>WENV181831366
OGUO01100532
16359
Bacillota
CGA
Ser
>WENV181830224
OGUO01001030
429429
Bacillota
CCA
Trp
>WENV181830479
OGUO01004136
429429
Bacillota
CCA
Trp
>WENV181831243
OGUO01061003
237271
Bacillota
TTT
Lys
>WENV181830196
OGUO01000861
313454
Bacillota
GAA
Phe
>WENV181830314
OGUO01001873
313454
Bacillota
GAA
Phe
>WENV181830667
OGUO01008417
44859
Bacillota
AAG
Leu
>WENV181830406
OGUO01003056
11034
Bacillota
GGA
Ser
>WENV181830649
OGUO01007729
11034
Bacillota
GGA
Ser
>WENV181830390
OGUO01002786
235079
Bacillota
GAA
Phe
>WENV181831303
OGUO01078768
80836
Bacillota
GTA
Tyr
>WENV181830799
OGUO01012642
235087
Bacillota
TGC
Ala
>WENV181830184
OGUO01000805
271471
Bacillota
GCC
Gly
>WENV181830222
OGUO01001025
245298
Bacillota
CGG
Pro
>WENV181829923
OGUO01000027
37269
Bacillota
TGA
Ser
>WENV181830094
OGUO01000426
37269
Bacillota
TGA
Ser
>WENV181831270
OGUO01067870
237262
Bacillota
CGT
Thr
>WENV181831373
OGUO01103254
155089
Bacillota
CAT
Met
>WENV181831002
OGUO01023503
287000
Bacillota
GTT
Asn
>WENV181829938
OGUO01000047
413152
Bacillota
TCC
Gly
>WENV181831195
OGUO01053322
45091
Bacillota
AAG
Leu
>WENV181830109
OGUO01000446
162445
Bacillota
CAT
Met
>WENV181830264
OGUO01001362
152492
Bacillota
GGG
Pro
>WENV181830367
OGUO01002586
152492
Bacillota
GGG
Pro
>WENV181829933
OGUO01000045
144610
Bacillota
GTG
His
>WENV181830052
OGUO01000334
144610
Bacillota
GTG
His
>WENV181830221
OGUO01001025
411547
Bacillota
CTG
Gln
>WENV181830430
OGUO01003436
411547
Bacillota
CTG
Gln
>WENV181830485
OGUO01004279
411547
Bacillota
CTG
Gln
>WENV181829948
OGUO01000070
147684
Bacillota
ACG
Arg
>WENV181830363
OGUO01002464
147684
Bacillota
ACG
Arg
>WENV181830570
OGUO01005885
4624
Bacillota
GCT
Ser
>WENV181831149
OGUO01043411
242249
Bacillota
TAC
Val
>WENV181830244
OGUO01001144
412387
Bacillota
GCA
Cys
>WENV181830680
OGUO01008713
313104
Bacillota
TAC
Val
>WENV181830372
OGUO01002616
313164
Bacillota
TTT
Lys
>WENV181830758
OGUO01011073
109476
Bacillota
TAG
Leu
>WENV181830186
OGUO01000822
18852
Bacillota
GCT
Ser
>WENV181830370
OGUO01002603
235095
Bacillota
GGT
Thr
>WENV181830635
OGUO01007557
235095
Bacillota
GGT
Thr
>WENV181830232
OGUO01001084
411549
Bacillota
TTG
Gln
>WENV181830590
OGUO01006521
411549
Bacillota
TTG
Gln
>WENV181830840
OGUO01013799
411549
Bacillota
TTG
Gln
>WENV181831046
OGUO01028209
235142
Bacillota
CTT
Lys
>WENV181830356
OGUO01002400
59296
Bacillota
AAG
Leu
>WENV181830530
OGUO01005058
148188
Bacillota
CCG
Arg
>WENV181830755
OGUO01010933
80612
Bacillota
GTA
Tyr
>WENV181830069
OGUO01000363
147674
Bacillota
TCT
Arg
>WENV181830813
OGUO01012980
163943
Bacillota
GTC
Asp
>WENV181830547
OGUO01005401
235124
Bacillota
TGG
Pro
>WENV181830842
OGUO01013869
235124
Bacillota
TGG
Pro
>WENV181830778
OGUO01011929
345314
Bacillota
TTG
Gln
>WENV181831060
OGUO01029644
338129
Bacillota
TGT
Thr
>WENV181830411
OGUO01003095
436750
Bacillota
TCC
Gly
>WENV181830098
OGUO01000441
157838
Bacillota
GTC
Asp
>WENV181830900
OGUO01016282
157838
Bacillota
GTC
Asp
>WENV181830925
OGUO01018308
144583
Bacillota
ACG
Arg
>WENV181830272
OGUO01001405
419877
Bacillota
TCC
Gly
>WENV181830924
OGUO01018241
235171
Bacillota
CCA
Trp
>WENV181830092
OGUO01000419
21693
Bacillota
GCT
Ser
>WENV181830412
OGUO01003095
144762
Bacillota
TCT
Arg
>WENV181830180
OGUO01000779
245296
Bacillota
CCC
Gly
>WENV181830467
OGUO01004034
272992
Bacillota
CTT
Lys
>WENV181830260
OGUO01001317
144594
Bacillota
CAC
Val
>WENV181830938
OGUO01019125
237908
Bacillota
>WENV181830666
OGUO01008354
95563
Bacillota
GTA
Tyr
>WENV181830939
OGUO01019125
339692
Bacillota
>WENV181831258
OGUO01065420
339692
Bacillota
>WENV181830310
OGUO01001749
376360
Bacillota
GCA
Cys
>WENV181830097
OGUO01000441
263523
Bacillota
TAC
Val
>WENV181830599
OGUO01006692
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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