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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181833685
OGUQ01005738
24650
Bacillota
TAA
Leu
>WENV181834018
OGUQ01024254
26899
Bacillota
GGA
Ser
>WENV181833930
OGUQ01016486
361659
Bacillota
GCC
Gly
>WENV181833682
OGUQ01005706
156958
Bacillota
GAT
Ile
>WENV181833406
OGUQ01001906
144612
Bacillota
TCT
Arg
>WENV181833167
OGUQ01000609
154063
Bacillota
CGG
Pro
>WENV181832907
OGUQ01000034
267649
Bacillota
TAC
Val
>WENV181833250
OGUQ01001017
267649
Bacillota
TAC
Val
>WENV181833252
OGUQ01001017
267649
Bacillota
TAC
Val
>WENV181833514
OGUQ01002936
235098
Bacillota
GAC
Val
>WENV181833806
OGUQ01009529
235098
Bacillota
GAC
Val
>WENV181833547
OGUQ01003362
44854
Bacillota
TGA
Ser
>WENV181833972
OGUQ01019347
356488
Bacillota
TGT
Thr
>WENV181833720
OGUQ01006585
235154
Bacillota
GTT
Asn
>WENV181834069
OGUQ01032264
246023
Bacillota
TGC
Ala
>WENV181833783
OGUQ01008616
338147
Bacillota
CTC
Glu
>WENV181833749
OGUQ01007268
155273
Bacillota
CAT
Met
>WENV181833929
OGUQ01016486
114359
Bacillota
TAG
Leu
>WENV181834196
OGUQ01054892
235137
Bacillota
TGC
Ala
>WENV181834097
OGUQ01037019
235294
Bacillota
TGC
Ala
>WENV181833031
OGUQ01000192
338143
Bacillota
CTC
Glu
>WENV181833307
OGUQ01001326
338143
Bacillota
CTC
Glu
>WENV181834125
OGUQ01041495
419288
Bacillota
GGT
Thr
>WENV181833145
OGUQ01000498
177274
Bacillota
CAT
Met
>WENV181833759
OGUQ01007658
341763
Bacillota
CTC
Glu
>WENV181834002
OGUQ01022569
44859
Bacillota
AAG
Leu
>WENV181834235
OGUQ01069328
16834
Bacillota
GCT
Ser
>WENV181833556
OGUQ01003489
11034
Bacillota
GGA
Ser
>WENV181833575
OGUQ01003840
156937
Bacillota
GTG
His
>WENV181833865
OGUQ01012426
7070
Bacillota
GGA
Ser
>WENV181833936
OGUQ01016829
338149
Bacillota
CTC
Glu
>WENV181833643
OGUQ01004996
258936
Bacillota
GGT
Thr
>WENV181832849
OGUQ01000001
152149
Bacillota
GTG
His
>WENV181833623
OGUQ01004725
162445
Bacillota
CAT
Met
>WENV181833517
OGUQ01002972
152492
Bacillota
GGG
Pro
>WENV181833065
OGUQ01000247
235078
Bacillota
TAC
Val
>WENV181833591
OGUQ01004237
100326
Bacillota
GTA
Tyr
>WENV181834089
OGUQ01035748
353537
Bacillota
GTT
Asn
>WENV181833066
OGUQ01000247
240017
Bacillota
GCC
Gly
>WENV181833422
OGUQ01002050
411547
Bacillota
CTG
Gln
>WENV181833548
OGUQ01003362
4624
Bacillota
GCT
Ser
>WENV181834094
OGUQ01036764
37363
Bacillota
AAG
Leu
>WENV181833561
OGUQ01003558
412387
Bacillota
GCA
Cys
>WENV181833562
OGUQ01003558
412387
Bacillota
GCA
Cys
>WENV181833114
OGUQ01000374
18852
Bacillota
GCT
Ser
>WENV181833743
OGUQ01007046
235095
Bacillota
GGT
Thr
>WENV181833657
OGUQ01005186
411549
Bacillota
TTG
Gln
>WENV181833910
OGUQ01015650
235142
Bacillota
CTT
Lys
>WENV181833815
OGUQ01009941
338410
Bacillota
TTC
Glu
>WENV181833672
OGUQ01005561
148188
Bacillota
CCG
Arg
>WENV181833673
OGUQ01005604
80612
Bacillota
GTA
Tyr
>WENV181833522
OGUQ01003027
256380
Bacillota
>WENV181833962
OGUQ01018356
411739
Bacillota
TCC
Gly
>WENV181833968
OGUQ01018964
235124
Bacillota
TGG
Pro
>WENV181833491
OGUQ01002631
338129
Bacillota
TGT
Thr
>WENV181833832
OGUQ01010375
144583
Bacillota
ACG
Arg
>WENV181833233
OGUQ01000946
144672
Bacillota
TCT
Arg
>WENV181834048
OGUQ01028767
247734
Bacillota
TGC
Ala
>WENV181833742
OGUQ01007046
235171
Bacillota
CCA
Trp
>WENV181833634
OGUQ01004832
238974
Bacillota
GAA
Phe
>WENV181834093
OGUQ01036461
238974
Bacillota
GAA
Phe
>WENV181833937
OGUQ01016829
144621
Bacillota
GTT
Asn
>WENV181833706
OGUQ01006099
235113
Bacillota
GAA
Phe
>WENV181834162
OGUQ01047568
353527
Bacillota
TTC
Glu
>WENV181833119
OGUQ01000385
243098
Bacillota
GGT
Thr
>WENV181833578
OGUQ01003905
58712
Bacillota
CAG
Leu
>WENV181833846
OGUQ01011132
245296
Bacillota
CCC
Gly
>WENV181833761
OGUQ01007732
272992
Bacillota
CTT
Lys
>WENV181834209
OGUQ01060594
273029
Bacillota
TGT
Thr
>WENV181832987
OGUQ01000121
344240
Bacillota
GCC
Gly
>WENV181833973
OGUQ01019538
144594
Bacillota
CAC
Val
>WENV181833959
OGUQ01018149
95563
Bacillota
GTA
Tyr
>WENV181833680
OGUQ01005699
338127
Bacillota
TTG
Gln
>WENV181833660
OGUQ01005252
272488
Bacillota
GAA
Phe
>WENV181833661
OGUQ01005252
238945
Bacillota
GCC
Gly
>WENV181833058
OGUQ01000233
338131
Bacillota
GCC
Gly
>WENV181833384
OGUQ01001723
338128
Bacillota
TTC
Glu
>WENV181833432
OGUQ01002093
338128
Bacillota
TTC
Glu
>WENV181833377
OGUQ01001704
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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