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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181852860
OGWH01005800
243201
Cyanobacteriota
CGC
Ala
>WENV181852790
OGWH01003180
145539
Cyanobacteriota
GTC
Asp
>WENV181852802
OGWH01003828
236095
Cyanobacteriota
TAC
Val
>WENV181852732
OGWH01001411
253528
Cyanobacteriota
CCA
Trp
>WENV181852696
OGWH01000523
343575
Cyanobacteriota
CAT
Met
>WENV181852809
OGWH01004003
148812
Cyanobacteriota
CGG
Pro
>WENV181852954
OGWH01013102
148812
Cyanobacteriota
CGG
Pro
>WENV181852981
OGWH01016811
279623
Cyanobacteriota
GAA
Phe
>WENV181853082
OGWH01030160
279623
Cyanobacteriota
GAA
Phe
>WENV181852649
OGWH01000111
359121
Cyanobacteriota
CGT
Thr
>WENV181852936
OGWH01010175
235792
Cyanobacteriota
CAT
Met
>WENV181853115
OGWH01035178
339061
Cyanobacteriota
CAC
Val
>WENV181852810
OGWH01004026
239594
Cyanobacteriota
TCT
Arg
>WENV181852718
OGWH01000932
153098
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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