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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
124 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181916397
OGYG01000010
196621
Bacillota
GTC
Asp
>WENV181916621
OGYG01000213
309417
Bacillota
GGC
Ala
>WENV181917008
OGYG01001487
144612
Bacillota
TCT
Arg
>WENV181917410
OGYG01015742
144612
Bacillota
TCT
Arg
>WENV181916476
OGYG01000055
267649
Bacillota
TAC
Val
>WENV181916478
OGYG01000055
267649
Bacillota
TAC
Val
>WENV181917327
OGYG01008330
235287
Bacillota
TTT
Lys
>WENV181916366
OGYG01000003
235098
Bacillota
GAC
Val
>WENV181916710
OGYG01000327
235098
Bacillota
GAC
Val
>WENV181917264
OGYG01006099
23769
Bacillota
TAA
Leu
>WENV181916399
OGYG01000010
44854
Bacillota
TGA
Ser
>WENV181917128
OGYG01002803
235154
Bacillota
GTT
Asn
>WENV181917551
OGYG01038857
149125
Bacillota
TCT
Arg
>WENV181917471
OGYG01022791
144577
Bacillota
GAT
Ile
>WENV181916933
OGYG01000957
37071
Bacillota
TGA
Ser
>WENV181917225
OGYG01004882
429443
Bacillota
GCA
Cys
>WENV181916473
OGYG01000049
302150
Bacillota
TAC
Val
>WENV181917324
OGYG01008073
246023
Bacillota
TGC
Ala
>WENV181916474
OGYG01000050
59312
Bacillota
CAG
Leu
>WENV181916497
OGYG01000068
59312
Bacillota
CAG
Leu
>WENV181916470
OGYG01000047
338147
Bacillota
CTC
Glu
>WENV181916521
OGYG01000093
338147
Bacillota
CTC
Glu
>WENV181916692
OGYG01000292
338147
Bacillota
CTC
Glu
>WENV181917087
OGYG01002258
235294
Bacillota
TGC
Ala
>WENV181916820
OGYG01000539
340802
Bacillota
TTG
Gln
>WENV181916883
OGYG01000756
340802
Bacillota
TTG
Gln
>WENV181916434
OGYG01000021
235114
Bacillota
TTT
Lys
>WENV181916842
OGYG01000586
235114
Bacillota
TTT
Lys
>WENV181917465
OGYG01021654
341763
Bacillota
CTC
Glu
>WENV181916756
OGYG01000441
144668
Bacillota
GTC
Asp
>WENV181916952
OGYG01001098
429429
Bacillota
CCA
Trp
>WENV181917090
OGYG01002279
429429
Bacillota
CCA
Trp
>WENV181917159
OGYG01003181
429429
Bacillota
CCA
Trp
>WENV181917302
OGYG01006980
429429
Bacillota
CCA
Trp
>WENV181916733
OGYG01000373
429429
Bacillota
CCA
Trp
>WENV181916849
OGYG01000622
429429
Bacillota
CCA
Trp
>WENV181917147
OGYG01003090
379268
Bacillota
TTC
Glu
>WENV181916495
OGYG01000068
44859
Bacillota
AAG
Leu
>WENV181916496
OGYG01000068
44859
Bacillota
AAG
Leu
>WENV181917481
OGYG01025689
96498
Bacillota
TAG
Leu
>WENV181916741
OGYG01000408
11034
Bacillota
GGA
Ser
>WENV181916630
OGYG01000217
235117
Bacillota
TAC
Val
>WENV181917341
OGYG01008956
247057
Bacillota
TGC
Ala
>WENV181916742
OGYG01000408
235079
Bacillota
GAA
Phe
>WENV181917361
OGYG01010096
114440
Bacillota
TAG
Leu
>WENV181917470
OGYG01022791
235087
Bacillota
TGC
Ala
>WENV181916401
OGYG01000010
338149
Bacillota
CTC
Glu
>WENV181916912
OGYG01000885
144766
Bacillota
CAT
Met
>WENV181916764
OGYG01000454
245298
Bacillota
CGG
Pro
>WENV181916724
OGYG01000346
37269
Bacillota
TGA
Ser
>WENV181916606
OGYG01000195
287000
Bacillota
GTT
Asn
>WENV181916720
OGYG01000344
169968
Bacillota
CAT
Met
>WENV181916875
OGYG01000738
162445
Bacillota
CAT
Met
>WENV181916973
OGYG01001261
162445
Bacillota
CAT
Met
>WENV181916975
OGYG01001261
162445
Bacillota
CAT
Met
>WENV181917323
OGYG01008073
201704
Bacillota
GAT
Ile
>WENV181916638
OGYG01000226
152492
Bacillota
GGG
Pro
>WENV181916949
OGYG01001090
152492
Bacillota
GGG
Pro
>WENV181917021
OGYG01001579
152492
Bacillota
GGG
Pro
>WENV181917120
OGYG01002563
152492
Bacillota
GGG
Pro
>WENV181917123
OGYG01002665
152492
Bacillota
GGG
Pro
>WENV181916964
OGYG01001166
100326
Bacillota
GTA
Tyr
>WENV181916432
OGYG01000021
144610
Bacillota
GTG
His
>WENV181916819
OGYG01000539
144610
Bacillota
GTG
His
>WENV181916882
OGYG01000756
144610
Bacillota
GTG
His
>WENV181916535
OGYG01000105
411547
Bacillota
CTG
Gln
>WENV181916763
OGYG01000454
411547
Bacillota
CTG
Gln
>WENV181916656
OGYG01000240
147684
Bacillota
ACG
Arg
>WENV181916765
OGYG01000457
147684
Bacillota
ACG
Arg
>WENV181916891
OGYG01000771
147684
Bacillota
ACG
Arg
>WENV181916400
OGYG01000010
4624
Bacillota
GCT
Ser
>WENV181916736
OGYG01000376
412387
Bacillota
GCA
Cys
>WENV181917071
OGYG01002017
412387
Bacillota
GCA
Cys
>WENV181917148
OGYG01003090
313104
Bacillota
TAC
Val
>WENV181916467
OGYG01000044
313164
Bacillota
TTT
Lys
>WENV181916576
OGYG01000162
313164
Bacillota
TTT
Lys
>WENV181916578
OGYG01000162
313164
Bacillota
TTT
Lys
>WENV181916852
OGYG01000630
18852
Bacillota
GCT
Ser
>WENV181917262
OGYG01006054
18852
Bacillota
GCT
Ser
>WENV181916398
OGYG01000010
235095
Bacillota
GGT
Thr
>WENV181916404
OGYG01000010
235095
Bacillota
GGT
Thr
>WENV181917292
OGYG01006681
344183
Bacillota
CTG
Gln
>WENV181916674
OGYG01000267
239832
Bacillota
TGT
Thr
>WENV181917497
OGYG01028566
198159
Bacillota
CAT
Met
>WENV181917245
OGYG01005310
419639
Bacillota
GCA
Cys
>WENV181917150
OGYG01003090
235289
Bacillota
GTT
Asn
>WENV181916622
OGYG01000213
411549
Bacillota
TTG
Gln
>WENV181916586
OGYG01000169
235142
Bacillota
CTT
Lys
>WENV181916636
OGYG01000222
235142
Bacillota
CTT
Lys
>WENV181917151
OGYG01003090
389572
Bacillota
>WENV181916771
OGYG01000482
148188
Bacillota
CCG
Arg
>WENV181916562
OGYG01000145
298639
Bacillota
GTT
Asn
>WENV181916848
OGYG01000621
80612
Bacillota
GTA
Tyr
>WENV181916761
OGYG01000447
256380
Bacillota
>WENV181917035
OGYG01001744
235127
Bacillota
TTT
Lys
>WENV181916519
OGYG01000092
298620
Bacillota
CAT
Met
>WENV181917119
OGYG01002541
235124
Bacillota
TGG
Pro
>WENV181916707
OGYG01000318
144583
Bacillota
ACG
Arg
>WENV181916582
OGYG01000162
144672
Bacillota
TCT
Arg
>WENV181916759
OGYG01000443
419877
Bacillota
TCC
Gly
>WENV181916396
OGYG01000010
235171
Bacillota
CCA
Trp
>WENV181916593
OGYG01000179
238974
Bacillota
GAA
Phe
>WENV181916959
OGYG01001107
238974
Bacillota
GAA
Phe
>WENV181916402
OGYG01000010
144621
Bacillota
GTT
Asn
>WENV181916893
OGYG01000790
144621
Bacillota
GTT
Asn
>WENV181916641
OGYG01000231
235113
Bacillota
GAA
Phe
>WENV181916841
OGYG01000586
235113
Bacillota
GAA
Phe
>WENV181917010
OGYG01001487
58712
Bacillota
CAG
Leu
>WENV181917261
OGYG01006047
58712
Bacillota
CAG
Leu
>WENV181916859
OGYG01000673
245296
Bacillota
CCC
Gly
>WENV181916988
OGYG01001327
272992
Bacillota
CTT
Lys
>WENV181917516
OGYG01032262
196632
Bacillota
GTC
Asp
>WENV181916818
OGYG01000539
157635
Bacillota
TCT
Arg
>WENV181916881
OGYG01000756
157635
Bacillota
TCT
Arg
>WENV181917488
OGYG01026826
299139
Bacillota
TGC
Ala
>WENV181916672
OGYG01000265
144594
Bacillota
CAC
Val
>WENV181916475
OGYG01000054
95563
Bacillota
GTA
Tyr
>WENV181916839
OGYG01000586
95563
Bacillota
GTA
Tyr
>WENV181917104
OGYG01002404
272488
Bacillota
GAA
Phe
>WENV181916938
OGYG01001028
114075
Bacillota
TAG
Leu
>WENV181917083
OGYG01002239
119513
Bacillota
CAA
Leu
>WENV181917478
OGYG01025559
338131
Bacillota
GCC
Gly
>WENV181917133
OGYG01002917
338128
Bacillota
TTC
Glu
>WENV181917517
OGYG01032262
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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