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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181951762
OGZH01007467
196621
Bacillota
GTC
Asp
>WENV181951854
OGZH01012561
155958
Bacillota
GAT
Ile
>WENV181951877
OGZH01013738
158247
Bacillota
>WENV181951924
OGZH01018580
144612
Bacillota
TCT
Arg
>WENV181951254
OGZH01000182
154063
Bacillota
CGG
Pro
>WENV181951665
OGZH01004503
267649
Bacillota
TAC
Val
>WENV181951921
OGZH01017657
235134
Bacillota
GAA
Phe
>WENV181951486
OGZH01001746
267556
Bacillota
TAC
Val
>WENV181951724
OGZH01006148
235098
Bacillota
GAC
Val
>WENV181951783
OGZH01008817
235098
Bacillota
GAC
Val
>WENV181951553
OGZH01002409
338152
Bacillota
TTC
Glu
>WENV181951504
OGZH01002061
340263
Bacillota
TTC
Glu
>WENV181951513
OGZH01002061
340263
Bacillota
TTC
Glu
>WENV181951506
OGZH01002061
148348
Bacillota
GTC
Asp
>WENV181951685
OGZH01004889
37071
Bacillota
TGA
Ser
>WENV181951797
OGZH01009548
429443
Bacillota
GCA
Cys
>WENV181951285
OGZH01000263
347827
Bacillota
TTC
Glu
>WENV181951546
OGZH01002361
239080
Bacillota
CTG
Gln
>WENV181951238
OGZH01000154
245370
Bacillota
TGT
Thr
>WENV181951318
OGZH01000420
338147
Bacillota
CTC
Glu
>WENV181951651
OGZH01004078
338147
Bacillota
CTC
Glu
>WENV181951935
OGZH01019923
338147
Bacillota
CTC
Glu
>WENV181951950
OGZH01021903
235150
Bacillota
TGC
Ala
>WENV181951348
OGZH01000562
428544
Bacillota
GCA
Cys
>WENV181951696
OGZH01005357
429429
Bacillota
CCA
Trp
>WENV181951733
OGZH01006421
44859
Bacillota
AAG
Leu
>WENV181951734
OGZH01006421
44859
Bacillota
AAG
Leu
>WENV181951684
OGZH01004839
11034
Bacillota
GGA
Ser
>WENV181951786
OGZH01008901
11034
Bacillota
GGA
Ser
>WENV181951507
OGZH01002061
239076
Bacillota
GAA
Phe
>WENV181951682
OGZH01004803
274189
Bacillota
TGT
Thr
>WENV181951817
OGZH01010512
295714
Bacillota
GCC
Gly
>WENV181951599
OGZH01003012
340265
Bacillota
GCC
Gly
>WENV181952031
OGZH01036554
340265
Bacillota
GCC
Gly
>WENV181951900
OGZH01015650
16266
Bacillota
GCT
Ser
>WENV181951695
OGZH01005228
245298
Bacillota
CGG
Pro
>WENV181951339
OGZH01000477
37269
Bacillota
TGA
Ser
>WENV181951698
OGZH01005399
37269
Bacillota
TGA
Ser
>WENV181952043
OGZH01039287
152492
Bacillota
GGG
Pro
>WENV181951471
OGZH01001565
100326
Bacillota
GTA
Tyr
>WENV181951892
OGZH01014939
144610
Bacillota
GTG
His
>WENV181951922
OGZH01017657
240017
Bacillota
GCC
Gly
>WENV181951437
OGZH01001276
411547
Bacillota
CTG
Gln
>WENV181951694
OGZH01005228
411547
Bacillota
CTG
Gln
>WENV181951961
OGZH01024100
411547
Bacillota
CTG
Gln
>WENV181951880
OGZH01013900
147684
Bacillota
ACG
Arg
>WENV181951763
OGZH01007467
235095
Bacillota
GGT
Thr
>WENV181951916
OGZH01017307
235095
Bacillota
GGT
Thr
>WENV181951330
OGZH01000474
344183
Bacillota
CTG
Gln
>WENV181952046
OGZH01039757
419945
Bacillota
GCA
Cys
>WENV181951505
OGZH01002061
239079
Bacillota
TAC
Val
>WENV181951514
OGZH01002061
239079
Bacillota
TAC
Val
>WENV181951690
OGZH01005045
411549
Bacillota
TTG
Gln
>WENV181951373
OGZH01000710
235142
Bacillota
CTT
Lys
>WENV181951775
OGZH01008193
235142
Bacillota
CTT
Lys
>WENV181951628
OGZH01003664
148188
Bacillota
CCG
Arg
>WENV181951814
OGZH01010256
80612
Bacillota
GTA
Tyr
>WENV181951530
OGZH01002216
256380
Bacillota
>WENV181951554
OGZH01002409
241432
Bacillota
TGT
Thr
>WENV181951631
OGZH01003796
235124
Bacillota
TGG
Pro
>WENV181951544
OGZH01002306
338129
Bacillota
TGT
Thr
>WENV181951860
OGZH01012843
247734
Bacillota
TGC
Ala
>WENV181951464
OGZH01001470
235171
Bacillota
CCA
Trp
>WENV181951499
OGZH01001944
238974
Bacillota
GAA
Phe
>WENV181951241
OGZH01000154
243098
Bacillota
GGT
Thr
>WENV181951813
OGZH01010256
58712
Bacillota
CAG
Leu
>WENV181951792
OGZH01009239
245296
Bacillota
CCC
Gly
>WENV181951503
OGZH01002061
239078
Bacillota
TTT
Lys
>WENV181952045
OGZH01039757
344240
Bacillota
GCC
Gly
>WENV181951680
OGZH01004771
196632
Bacillota
GTC
Asp
>WENV181951869
OGZH01013317
144594
Bacillota
CAC
Val
>WENV181951784
OGZH01008842
95563
Bacillota
GTA
Tyr
>WENV181951688
OGZH01004979
414486
Bacillota
CCC
Gly
>WENV181951538
OGZH01002269
272488
Bacillota
GAA
Phe
>WENV181951392
OGZH01000870
114075
Bacillota
TAG
Leu
>WENV181951741
OGZH01006508
292012
Bacillota
TGC
Ala
>WENV181951936
OGZH01020771
273862
Bacillota
TGC
Ala
>WENV181951452
OGZH01001430
338128
Bacillota
TTC
Glu
>WENV181951975
OGZH01025552
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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