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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181985606
OHAJ01005193
144620
Thermodesulfobacteriota
GGG
Pro
>WENV181985325
OHAJ01001890
156932
Thermodesulfobacteriota
ACG
Arg
>WENV181985466
OHAJ01003231
156932
Thermodesulfobacteriota
ACG
Arg
>WENV181985921
OHAJ01015999
156932
Thermodesulfobacteriota
ACG
Arg
>WENV181985402
OHAJ01002522
345926
Thermodesulfobacteriota
CTG
Gln
>WENV181985971
OHAJ01019209
151846
Thermodesulfobacteriota
CCA
Trp
>WENV181986111
OHAJ01036448
151846
Thermodesulfobacteriota
CCA
Trp
>WENV181985239
OHAJ01001443
248694
Thermodesulfobacteriota
CAT
Met
>WENV181985316
OHAJ01001830
3467
Thermodesulfobacteriota
CGA
Ser
>WENV181984920
OHAJ01000197
293933
Thermodesulfobacteriota
TTT
Lys
>WENV181985324
OHAJ01001890
128663
Thermodesulfobacteriota
CGG
Pro
>WENV181985054
OHAJ01000495
179273
Thermodesulfobacteriota
GTC
Asp
>WENV181985403
OHAJ01002522
156452
Thermodesulfobacteriota
TTC
Glu
>WENV181985383
OHAJ01002289
248567
Thermodesulfobacteriota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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