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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182000311
OHAX01012503
235146
Actinomycetota
CGT
Thr
>WENV182000339
OHAX01015592
235347
Actinomycetota
GGC
Ala
>WENV181999803
OHAX01000045
235153
Actinomycetota
CCT
Arg
>WENV182000286
OHAX01009372
144600
Actinomycetota
TGG
Pro
>WENV182000284
OHAX01008731
235092
Actinomycetota
CCG
Arg
>WENV182000309
OHAX01011985
235194
Actinomycetota
GTG
His
>WENV181999790
OHAX01000032
245301
Actinomycetota
GCC
Gly
>WENV181999792
OHAX01000032
245301
Actinomycetota
GCC
Gly
>WENV181999793
OHAX01000032
245301
Actinomycetota
GCC
Gly
>WENV182000332
OHAX01015060
411601
Actinomycetota
CCC
Gly
>WENV182000377
OHAX01022464
144826
Actinomycetota
GGG
Pro
>WENV182000227
OHAX01004509
23370
Actinomycetota
GCT
Ser
>WENV182000386
OHAX01026699
147146
Actinomycetota
ACG
Arg
>WENV182000351
OHAX01017885
44929
Actinomycetota
GGA
Ser
>WENV182000353
OHAX01018080
235174
Actinomycetota
TGC
Ala
>WENV182000314
OHAX01012811
235101
Actinomycetota
TTT
Lys
>WENV182000197
OHAX01003343
121510
Actinomycetota
TAA
Leu
>WENV181999748
OHAX01000003
153948
Actinomycetota
GGG
Pro
>WENV182000224
OHAX01004394
44855
Actinomycetota
TGA
Ser
>WENV182000272
OHAX01007680
413665
Actinomycetota
TTG
Gln
>WENV182000234
OHAX01004900
144700
Actinomycetota
CAT
Met
>WENV181999941
OHAX01000241
144636
Actinomycetota
GAT
Ile
>WENV182000192
OHAX01003184
147739
Actinomycetota
CAT
Met
>WENV182000225
OHAX01004403
144595
Actinomycetota
CAA
Leu
>WENV182000412
OHAX01038177
240009
Actinomycetota
GGC
Ala
>WENV181999750
OHAX01000003
414234
Actinomycetota
CTG
Gln
>WENV181999902
OHAX01000178
153915
Actinomycetota
ACG
Arg
>WENV182000381
OHAX01025780
80622
Actinomycetota
CAG
Leu
>WENV182000398
OHAX01029360
147734
Actinomycetota
GTC
Asp
>WENV181999791
OHAX01000032
412834
Actinomycetota
GCA
Cys
>WENV182000305
OHAX01011375
243162
Actinomycetota
GTT
Asn
>WENV182000233
OHAX01004900
95593
Actinomycetota
>WENV182000343
OHAX01016385
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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