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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182151631
OHLJ01028639
158247
Bacillota
>WENV182151620
OHLJ01026546
144612
Bacillota
TCT
Arg
>WENV182151476
OHLJ01009185
235098
Bacillota
GAC
Val
>WENV182151193
OHLJ01001049
148239
Bacillota
TCT
Arg
>WENV182151444
OHLJ01006984
44854
Bacillota
TGA
Ser
>WENV182151323
OHLJ01003151
235154
Bacillota
GTT
Asn
>WENV182151624
OHLJ01027163
238910
Bacillota
CTT
Lys
>WENV182151474
OHLJ01008870
338147
Bacillota
CTC
Glu
>WENV182151592
OHLJ01021551
235150
Bacillota
TGC
Ala
>WENV182151615
OHLJ01024858
235137
Bacillota
TGC
Ala
>WENV182151582
OHLJ01019690
144668
Bacillota
GTC
Asp
>WENV182151356
OHLJ01004062
182792
Bacillota
GTC
Asp
>WENV182151457
OHLJ01008121
44859
Bacillota
AAG
Leu
>WENV182151603
OHLJ01022811
11034
Bacillota
GGA
Ser
>WENV182151283
OHLJ01002332
235079
Bacillota
GAA
Phe
>WENV182151447
OHLJ01007127
173314
Bacillota
GAT
Ile
>WENV182151411
OHLJ01005775
338149
Bacillota
CTC
Glu
>WENV182151507
OHLJ01010992
245298
Bacillota
CGG
Pro
>WENV182151124
OHLJ01000591
37269
Bacillota
TGA
Ser
>WENV182151210
OHLJ01001214
37269
Bacillota
TGA
Ser
>WENV182151428
OHLJ01006368
155089
Bacillota
CAT
Met
>WENV182151337
OHLJ01003564
169968
Bacillota
CAT
Met
>WENV182151179
OHLJ01000976
235078
Bacillota
TAC
Val
>WENV182151239
OHLJ01001541
100326
Bacillota
GTA
Tyr
>WENV182151194
OHLJ01001049
144610
Bacillota
GTG
His
>WENV182151182
OHLJ01000976
240017
Bacillota
GCC
Gly
>WENV182151506
OHLJ01010992
411547
Bacillota
CTG
Gln
>WENV182151445
OHLJ01006984
4624
Bacillota
GCT
Ser
>WENV182151357
OHLJ01004062
235095
Bacillota
GGT
Thr
>WENV182151359
OHLJ01004062
235095
Bacillota
GGT
Thr
>WENV182151414
OHLJ01005831
411549
Bacillota
TTG
Gln
>WENV182151390
OHLJ01004941
235142
Bacillota
CTT
Lys
>WENV182151368
OHLJ01004345
148188
Bacillota
CCG
Arg
>WENV182151308
OHLJ01002926
237846
Bacillota
GCC
Gly
>WENV182151051
OHLJ01000262
256380
Bacillota
>WENV182151526
OHLJ01012731
235124
Bacillota
TGG
Pro
>WENV182151628
OHLJ01027333
338129
Bacillota
TGT
Thr
>WENV182151481
OHLJ01009630
144583
Bacillota
ACG
Arg
>WENV182151355
OHLJ01004062
235171
Bacillota
CCA
Trp
>WENV182151044
OHLJ01000247
238974
Bacillota
GAA
Phe
>WENV182151412
OHLJ01005775
144621
Bacillota
GTT
Asn
>WENV182151353
OHLJ01004041
243098
Bacillota
GGT
Thr
>WENV182151413
OHLJ01005813
58712
Bacillota
CAG
Leu
>WENV182151483
OHLJ01009951
245296
Bacillota
CCC
Gly
>WENV182151487
OHLJ01010443
245296
Bacillota
CCC
Gly
>WENV182151328
OHLJ01003279
272992
Bacillota
CTT
Lys
>WENV182151303
OHLJ01002732
344240
Bacillota
GCC
Gly
>WENV182151405
OHLJ01005521
144594
Bacillota
CAC
Val
>WENV182151540
OHLJ01014483
420471
Bacillota
TCC
Gly
>WENV182151251
OHLJ01001688
95563
Bacillota
GTA
Tyr
>WENV182151062
OHLJ01000294
338127
Bacillota
TTG
Gln
>WENV182151024
OHLJ01000176
414486
Bacillota
CCC
Gly
>WENV182150990
OHLJ01000098
272488
Bacillota
GAA
Phe
>WENV182151148
OHLJ01000756
272488
Bacillota
GAA
Phe
>WENV182151436
OHLJ01006587
114075
Bacillota
TAG
Leu
>WENV182151165
OHLJ01000887
238945
Bacillota
GCC
Gly
>WENV182151284
OHLJ01002332
249259
Bacillota
GCC
Gly
>WENV182151446
OHLJ01007127
273862
Bacillota
TGC
Ala
>WENV182151609
OHLJ01023891
273862
Bacillota
TGC
Ala
>WENV182151279
OHLJ01002305
338128
Bacillota
TTC
Glu
>WENV182151302
OHLJ01002732
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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