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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182216184
OHQM01030687
202812
Bacillota
CAT
Met
>WENV182216137
OHQM01022071
318890
Bacillota
TGC
Ala
>WENV182216079
OHQM01016577
235098
Bacillota
GAC
Val
>WENV182215915
OHQM01006368
235154
Bacillota
GTT
Asn
>WENV182215478
OHQM01000162
59312
Bacillota
CAG
Leu
>WENV182215980
OHQM01009584
238910
Bacillota
CTT
Lys
>WENV182216252
OHQM01044536
235137
Bacillota
TGC
Ala
>WENV182216173
OHQM01027426
341763
Bacillota
CTC
Glu
>WENV182216278
OHQM01053468
388249
Bacillota
GCA
Cys
>WENV182215757
OHQM01001963
144668
Bacillota
GTC
Asp
>WENV182215566
OHQM01000449
429429
Bacillota
CCA
Trp
>WENV182216135
OHQM01021888
429429
Bacillota
CCA
Trp
>WENV182215654
OHQM01000985
169927
Bacillota
GTC
Asp
>WENV182215774
OHQM01002130
169927
Bacillota
GTC
Asp
>WENV182215574
OHQM01000481
313454
Bacillota
GAA
Phe
>WENV182216244
OHQM01043129
44859
Bacillota
AAG
Leu
>WENV182216050
OHQM01014865
11034
Bacillota
GGA
Ser
>WENV182216067
OHQM01015832
173314
Bacillota
GAT
Ile
>WENV182215842
OHQM01004286
37269
Bacillota
TGA
Ser
>WENV182215610
OHQM01000610
287000
Bacillota
GTT
Asn
>WENV182215772
OHQM01002130
348433
Bacillota
TTC
Glu
>WENV182216098
OHQM01019157
201704
Bacillota
GAT
Ile
>WENV182215637
OHQM01000857
100326
Bacillota
GTA
Tyr
>WENV182215701
OHQM01001428
144610
Bacillota
GTG
His
>WENV182216268
OHQM01050357
412387
Bacillota
GCA
Cys
>WENV182216253
OHQM01045408
313104
Bacillota
TAC
Val
>WENV182215575
OHQM01000481
313164
Bacillota
TTT
Lys
>WENV182216065
OHQM01015781
185292
Bacillota
ACG
Arg
>WENV182216178
OHQM01028119
59296
Bacillota
AAG
Leu
>WENV182216273
OHQM01051714
154711
Bacillota
TGG
Pro
>WENV182215502
OHQM01000210
256380
Bacillota
>WENV182215896
OHQM01005949
147674
Bacillota
TCT
Arg
>WENV182216122
OHQM01020890
310822
Bacillota
CTT
Lys
>WENV182215894
OHQM01005949
238974
Bacillota
GAA
Phe
>WENV182215681
OHQM01001204
338131
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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