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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182298945
OHWK01000045
158247
Bacillota
>WENV182299346
OHWK01001623
144612
Bacillota
TCT
Arg
>WENV182298997
OHWK01000090
235134
Bacillota
GAA
Phe
>WENV182299537
OHWK01011033
338152
Bacillota
TTC
Glu
>WENV182299636
OHWK01028179
235154
Bacillota
GTT
Asn
>WENV182299371
OHWK01002018
37071
Bacillota
TGA
Ser
>WENV182299291
OHWK01001005
59312
Bacillota
CAG
Leu
>WENV182299036
OHWK01000164
338147
Bacillota
CTC
Glu
>WENV182299076
OHWK01000193
338147
Bacillota
CTC
Glu
>WENV182299174
OHWK01000413
338147
Bacillota
CTC
Glu
>WENV182299395
OHWK01002792
235294
Bacillota
TGC
Ala
>WENV182299564
OHWK01013859
293599
Bacillota
CTT
Lys
>WENV182299628
OHWK01026471
281701
Bacillota
TGC
Ala
>WENV182299052
OHWK01000168
235114
Bacillota
TTT
Lys
>WENV182299075
OHWK01000188
235114
Bacillota
TTT
Lys
>WENV182299418
OHWK01003959
37083
Bacillota
TGA
Ser
>WENV182299328
OHWK01001377
429429
Bacillota
CCA
Trp
>WENV182299282
OHWK01000952
41154
Bacillota
TAA
Leu
>WENV182299597
OHWK01020376
44859
Bacillota
AAG
Leu
>WENV182299061
OHWK01000179
235079
Bacillota
GAA
Phe
>WENV182299013
OHWK01000119
37269
Bacillota
TGA
Ser
>WENV182299536
OHWK01011033
287000
Bacillota
GTT
Asn
>WENV182299222
OHWK01000684
413152
Bacillota
TCC
Gly
>WENV182298873
OHWK01000007
152149
Bacillota
GTG
His
>WENV182299570
OHWK01015025
201704
Bacillota
GAT
Ile
>WENV182298853
OHWK01000003
152492
Bacillota
GGG
Pro
>WENV182299050
OHWK01000168
144610
Bacillota
GTG
His
>WENV182298998
OHWK01000090
240017
Bacillota
GCC
Gly
>WENV182298946
OHWK01000048
147684
Bacillota
ACG
Arg
>WENV182299271
OHWK01000858
147684
Bacillota
ACG
Arg
>WENV182299312
OHWK01001176
412387
Bacillota
GCA
Cys
>WENV182299322
OHWK01001276
18852
Bacillota
GCT
Ser
>WENV182299599
OHWK01020920
293430
Bacillota
CTT
Lys
>WENV182299557
OHWK01012625
154748
Bacillota
GTC
Asp
>WENV182298959
OHWK01000066
235142
Bacillota
CTT
Lys
>WENV182299205
OHWK01000547
235142
Bacillota
CTT
Lys
>WENV182299593
OHWK01020128
148188
Bacillota
CCG
Arg
>WENV182299304
OHWK01001129
235127
Bacillota
TTT
Lys
>WENV182299069
OHWK01000188
144652
Bacillota
GTC
Asp
>WENV182299074
OHWK01000188
235113
Bacillota
GAA
Phe
>WENV182299524
OHWK01009702
157635
Bacillota
TCT
Arg
>WENV182299072
OHWK01000188
95563
Bacillota
GTA
Tyr
>WENV182299507
OHWK01008809
272488
Bacillota
GAA
Phe
>WENV182299433
OHWK01004956
273862
Bacillota
TGC
Ala
>WENV182299398
OHWK01002792
338207
Bacillota
TTC
Glu
>WENV182299258
OHWK01000848
338128
Bacillota
TTC
Glu
>WENV182299316
OHWK01001232
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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