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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182313480
OHXY01015562
24650
Bacillota
TAA
Leu
>WENV182313373
OHXY01006090
196621
Bacillota
GTC
Asp
>WENV182313482
OHXY01015732
144612
Bacillota
TCT
Arg
>WENV182313510
OHXY01020515
144612
Bacillota
TCT
Arg
>WENV182313529
OHXY01025524
235287
Bacillota
TTT
Lys
>WENV182313361
OHXY01005439
235098
Bacillota
GAC
Val
>WENV182313259
OHXY01000863
338152
Bacillota
TTC
Glu
>WENV182313225
OHXY01000285
148239
Bacillota
TCT
Arg
>WENV182313283
OHXY01001382
44854
Bacillota
TGA
Ser
>WENV182313298
OHXY01001967
304022
Bacillota
GCC
Gly
>WENV182313461
OHXY01013291
307003
Bacillota
TGC
Ala
>WENV182313240
OHXY01000457
59312
Bacillota
CAG
Leu
>WENV182313330
OHXY01003391
238910
Bacillota
CTT
Lys
>WENV182313146
OHXY01000008
338147
Bacillota
CTC
Glu
>WENV182313231
OHXY01000303
338147
Bacillota
CTC
Glu
>WENV182313471
OHXY01014388
235294
Bacillota
TGC
Ala
>WENV182313347
OHXY01004470
340802
Bacillota
TTG
Gln
>WENV182313342
OHXY01004118
293599
Bacillota
CTT
Lys
>WENV182313250
OHXY01000628
235114
Bacillota
TTT
Lys
>WENV182313211
OHXY01000219
429429
Bacillota
CCA
Trp
>WENV182313458
OHXY01013231
379268
Bacillota
TTC
Glu
>WENV182313234
OHXY01000353
44859
Bacillota
AAG
Leu
>WENV182313412
OHXY01008617
11034
Bacillota
GGA
Ser
>WENV182313297
OHXY01001967
235079
Bacillota
GAA
Phe
>WENV182313187
OHXY01000093
173314
Bacillota
GAT
Ile
>WENV182313385
OHXY01006788
245298
Bacillota
CGG
Pro
>WENV182313261
OHXY01000875
287000
Bacillota
GTT
Asn
>WENV182313277
OHXY01001286
162445
Bacillota
CAT
Met
>WENV182313463
OHXY01013295
152492
Bacillota
GGG
Pro
>WENV182313195
OHXY01000124
235078
Bacillota
TAC
Val
>WENV182313150
OHXY01000018
100326
Bacillota
GTA
Tyr
>WENV182313226
OHXY01000285
144610
Bacillota
GTG
His
>WENV182313198
OHXY01000124
240017
Bacillota
GCC
Gly
>WENV182313514
OHXY01021338
411547
Bacillota
CTG
Gln
>WENV182313284
OHXY01001382
4624
Bacillota
GCT
Ser
>WENV182313459
OHXY01013231
313104
Bacillota
TAC
Val
>WENV182313374
OHXY01006090
235095
Bacillota
GGT
Thr
>WENV182313493
OHXY01017048
239832
Bacillota
TGT
Thr
>WENV182313430
OHXY01010189
411549
Bacillota
TTG
Gln
>WENV182313204
OHXY01000158
235142
Bacillota
CTT
Lys
>WENV182313239
OHXY01000456
235142
Bacillota
CTT
Lys
>WENV182313285
OHXY01001388
148188
Bacillota
CCG
Arg
>WENV182313369
OHXY01005848
298620
Bacillota
CAT
Met
>WENV182313466
OHXY01013663
241432
Bacillota
TGT
Thr
>WENV182313426
OHXY01010061
338129
Bacillota
TGT
Thr
>WENV182313478
OHXY01015393
144583
Bacillota
ACG
Arg
>WENV182313332
OHXY01003569
247734
Bacillota
TGC
Ala
>WENV182313372
OHXY01006090
235171
Bacillota
CCA
Trp
>WENV182313249
OHXY01000628
235113
Bacillota
GAA
Phe
>WENV182313427
OHXY01010152
243098
Bacillota
GGT
Thr
>WENV182313394
OHXY01007240
58712
Bacillota
CAG
Leu
>WENV182313429
OHXY01010173
245296
Bacillota
CCC
Gly
>WENV182313390
OHXY01006981
272992
Bacillota
CTT
Lys
>WENV182313447
OHXY01012163
344240
Bacillota
GCC
Gly
>WENV182313487
OHXY01015899
144594
Bacillota
CAC
Val
>WENV182313264
OHXY01000875
95563
Bacillota
GTA
Tyr
>WENV182313498
OHXY01018371
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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