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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182329146
OHZD01009602
24650
Bacillota
TAA
Leu
>WENV182328698
OHZD01000028
37213
Bacillota
TGA
Ser
>WENV182329044
OHZD01004397
144612
Bacillota
TCT
Arg
>WENV182329256
OHZD01027669
154063
Bacillota
CGG
Pro
>WENV182328791
OHZD01000268
235098
Bacillota
GAC
Val
>WENV182329034
OHZD01004011
235098
Bacillota
GAC
Val
>WENV182328830
OHZD01000470
338152
Bacillota
TTC
Glu
>WENV182329236
OHZD01023714
44854
Bacillota
TGA
Ser
>WENV182329167
OHZD01012346
235154
Bacillota
GTT
Asn
>WENV182328729
OHZD01000072
59312
Bacillota
CAG
Leu
>WENV182328759
OHZD01000136
59312
Bacillota
CAG
Leu
>WENV182328671
OHZD01000001
338147
Bacillota
CTC
Glu
>WENV182328672
OHZD01000001
338147
Bacillota
CTC
Glu
>WENV182328673
OHZD01000001
338147
Bacillota
CTC
Glu
>WENV182328703
OHZD01000036
338147
Bacillota
CTC
Glu
>WENV182328749
OHZD01000107
338147
Bacillota
CTC
Glu
>WENV182328754
OHZD01000125
338147
Bacillota
CTC
Glu
>WENV182329169
OHZD01012435
235091
Bacillota
CTT
Lys
>WENV182329019
OHZD01003485
44859
Bacillota
AAG
Leu
>WENV182329088
OHZD01005585
11034
Bacillota
GGA
Ser
>WENV182329111
OHZD01006851
247057
Bacillota
TGC
Ala
>WENV182328916
OHZD01001370
235079
Bacillota
GAA
Phe
>WENV182329086
OHZD01005553
338149
Bacillota
CTC
Glu
>WENV182329004
OHZD01002943
245298
Bacillota
CGG
Pro
>WENV182328797
OHZD01000297
37269
Bacillota
TGA
Ser
>WENV182328952
OHZD01002027
37269
Bacillota
TGA
Ser
>WENV182329068
OHZD01005121
162445
Bacillota
CAT
Met
>WENV182328860
OHZD01000696
152492
Bacillota
GGG
Pro
>WENV182328866
OHZD01000724
152492
Bacillota
GGG
Pro
>WENV182328810
OHZD01000375
235078
Bacillota
TAC
Val
>WENV182328813
OHZD01000375
240017
Bacillota
GCC
Gly
>WENV182329003
OHZD01002943
411547
Bacillota
CTG
Gln
>WENV182329020
OHZD01003488
411547
Bacillota
CTG
Gln
>WENV182329104
OHZD01006490
411547
Bacillota
CTG
Gln
>WENV182328763
OHZD01000167
147684
Bacillota
ACG
Arg
>WENV182328827
OHZD01000450
147684
Bacillota
ACG
Arg
>WENV182328949
OHZD01001961
147684
Bacillota
ACG
Arg
>WENV182329237
OHZD01023714
4624
Bacillota
GCT
Ser
>WENV182328945
OHZD01001917
412387
Bacillota
GCA
Cys
>WENV182329261
OHZD01029043
412387
Bacillota
GCA
Cys
>WENV182329076
OHZD01005294
254697
Bacillota
TTT
Lys
>WENV182328980
OHZD01002565
235095
Bacillota
GGT
Thr
>WENV182329143
OHZD01009573
235095
Bacillota
GGT
Thr
>WENV182329064
OHZD01005121
239832
Bacillota
TGT
Thr
>WENV182329059
OHZD01004957
411549
Bacillota
TTG
Gln
>WENV182328719
OHZD01000052
235142
Bacillota
CTT
Lys
>WENV182328773
OHZD01000210
235142
Bacillota
CTT
Lys
>WENV182329000
OHZD01002882
148188
Bacillota
CCG
Arg
>WENV182329163
OHZD01011465
80612
Bacillota
GTA
Tyr
>WENV182328742
OHZD01000094
256380
Bacillota
>WENV182329032
OHZD01003989
235124
Bacillota
TGG
Pro
>WENV182329041
OHZD01004308
235124
Bacillota
TGG
Pro
>WENV182329027
OHZD01003692
338129
Bacillota
TGT
Thr
>WENV182328730
OHZD01000074
247734
Bacillota
TGC
Ala
>WENV182329141
OHZD01009573
235171
Bacillota
CCA
Trp
>WENV182329176
OHZD01013717
235171
Bacillota
CCA
Trp
>WENV182329087
OHZD01005553
144621
Bacillota
GTT
Asn
>WENV182328736
OHZD01000084
235113
Bacillota
GAA
Phe
>WENV182328966
OHZD01002179
58712
Bacillota
CAG
Leu
>WENV182329228
OHZD01021548
245296
Bacillota
CCC
Gly
>WENV182329006
OHZD01002970
144594
Bacillota
CAC
Val
>WENV182328753
OHZD01000125
95563
Bacillota
GTA
Tyr
>WENV182329271
OHZD01033980
119513
Bacillota
CAA
Leu
>WENV182328819
OHZD01000397
238945
Bacillota
GCC
Gly
>WENV182328820
OHZD01000401
238945
Bacillota
GCC
Gly
>WENV182328842
OHZD01000546
238945
Bacillota
GCC
Gly
>WENV182328739
OHZD01000088
238945
Bacillota
GCC
Gly
>WENV182328917
OHZD01001370
249259
Bacillota
GCC
Gly
>WENV182328840
OHZD01000523
338128
Bacillota
TTC
Glu
>WENV182328993
OHZD01002748
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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