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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182336171
OHZS01005522
235146
Actinomycetota
CGT
Thr
>WENV182335752
OHZS01000026
119475
Actinomycetota
TAA
Leu
>WENV182336330
OHZS01014483
235347
Actinomycetota
GGC
Ala
>WENV182336405
OHZS01020053
235153
Actinomycetota
CCT
Arg
>WENV182335746
OHZS01000019
144589
Actinomycetota
ACG
Arg
>WENV182335887
OHZS01000425
37070
Actinomycetota
CGA
Ser
>WENV182336575
OHZS01043798
144600
Actinomycetota
TGG
Pro
>WENV182335872
OHZS01000337
235092
Actinomycetota
CCG
Arg
>WENV182336264
OHZS01008913
261773
Actinomycetota
CCT
Arg
>WENV182335913
OHZS01000562
245301
Actinomycetota
GCC
Gly
>WENV182336289
OHZS01010831
411601
Actinomycetota
CCC
Gly
>WENV182336201
OHZS01006817
241401
Actinomycetota
CCA
Trp
>WENV182335835
OHZS01000204
16219
Actinomycetota
GCT
Ser
>WENV182335824
OHZS01000169
235174
Actinomycetota
TGC
Ala
>WENV182335971
OHZS01000933
235101
Actinomycetota
TTT
Lys
>WENV182336026
OHZS01001605
144625
Actinomycetota
GTC
Asp
>WENV182336036
OHZS01001721
153948
Actinomycetota
GGG
Pro
>WENV182336327
OHZS01014166
235199
Actinomycetota
CAC
Val
>WENV182336165
OHZS01005332
44862
Actinomycetota
CGA
Ser
>WENV182336230
OHZS01007302
313386
Actinomycetota
CGT
Thr
>WENV182335814
OHZS01000141
198659
Actinomycetota
TAC
Val
>WENV182335811
OHZS01000126
16223
Actinomycetota
GAG
Leu
>WENV182336077
OHZS01002658
144636
Actinomycetota
GAT
Ile
>WENV182335868
OHZS01000322
98279
Actinomycetota
GTA
Tyr
>WENV182335827
OHZS01000176
338148
Actinomycetota
CTG
Gln
>WENV182335738
OHZS01000014
235148
Actinomycetota
GTT
Asn
>WENV182335764
OHZS01000042
235148
Actinomycetota
GTT
Asn
>WENV182336023
OHZS01001538
176456
Actinomycetota
TCT
Arg
>WENV182336258
OHZS01008751
151943
Actinomycetota
>WENV182336034
OHZS01001680
338139
Actinomycetota
GTT
Asn
>WENV182336035
OHZS01001680
338139
Actinomycetota
GTT
Asn
>WENV182336424
OHZS01021436
235348
Actinomycetota
CCT
Arg
>WENV182336346
OHZS01015817
37521
Actinomycetota
GCT
Ser
>WENV182335878
OHZS01000363
411554
Actinomycetota
CCC
Gly
>WENV182335840
OHZS01000214
113601
Actinomycetota
TAG
Leu
>WENV182335753
OHZS01000026
144595
Actinomycetota
CAA
Leu
>WENV182335741
OHZS01000014
145343
Actinomycetota
GGG
Pro
>WENV182335832
OHZS01000192
235149
Actinomycetota
CCT
Arg
>WENV182336011
OHZS01001376
414234
Actinomycetota
CTG
Gln
>WENV182335877
OHZS01000363
91808
Actinomycetota
CAG
Leu
>WENV182335839
OHZS01000214
235121
Actinomycetota
CGT
Thr
>WENV182336027
OHZS01001605
393408
Actinomycetota
TTC
Glu
>WENV182335754
OHZS01000026
144635
Actinomycetota
TGG
Pro
>WENV182336088
OHZS01002991
144635
Actinomycetota
TGG
Pro
>WENV182335861
OHZS01000286
44851
Actinomycetota
TGA
Ser
>WENV182335952
OHZS01000831
158513
Actinomycetota
TGG
Pro
>WENV182335936
OHZS01000703
235173
Actinomycetota
GGC
Ala
>WENV182336042
OHZS01001841
278447
Actinomycetota
GTG
His
>WENV182336386
OHZS01018575
95593
Actinomycetota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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