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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182349707
OIBC01011106
119475
Actinomycetota
TAA
Leu
>WENV182349706
OIBC01011058
144589
Actinomycetota
ACG
Arg
>WENV182349560
OIBC01003202
37070
Actinomycetota
CGA
Ser
>WENV182349405
OIBC01000473
235092
Actinomycetota
CCG
Arg
>WENV182349537
OIBC01002400
235174
Actinomycetota
TGC
Ala
>WENV182349575
OIBC01003543
235101
Actinomycetota
TTT
Lys
>WENV182349507
OIBC01001706
144625
Actinomycetota
GTC
Asp
>WENV182349760
OIBC01018383
150473
Actinomycetota
CTC
Glu
>WENV182349450
OIBC01000764
145345
Actinomycetota
TAC
Val
>WENV182349746
OIBC01015838
144593
Actinomycetota
TAT
Ile
>WENV182349522
OIBC01001987
98279
Actinomycetota
GTA
Tyr
>WENV182349591
OIBC01004033
338148
Actinomycetota
CTG
Gln
>WENV182349478
OIBC01001230
235148
Actinomycetota
GTT
Asn
>WENV182349668
OIBC01007501
176456
Actinomycetota
TCT
Arg
>WENV182349564
OIBC01003305
113601
Actinomycetota
TAG
Leu
>WENV182349544
OIBC01002612
144595
Actinomycetota
CAA
Leu
>WENV182349563
OIBC01003305
235121
Actinomycetota
CGT
Thr
>WENV182349533
OIBC01002244
144635
Actinomycetota
TGG
Pro
>WENV182349759
OIBC01018383
429234
Actinomycetota
CTG
Gln
>WENV182349738
OIBC01014003
44851
Actinomycetota
TGA
Ser
>WENV182349538
OIBC01002400
235173
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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