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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182410288
OIFK01001283
248982
Bacillota
TTT
Lys
>WENV182410063
OIFK01000028
37110
Bacillota
TAA
Leu
>WENV182410066
OIFK01000028
37110
Bacillota
TAA
Leu
>WENV182410145
OIFK01000188
16842
Bacillota
CGA
Ser
>WENV182410318
OIFK01002121
235693
Bacillota
GGT
Thr
>WENV182410059
OIFK01000028
16815
Bacillota
TGA
Ser
>WENV182410060
OIFK01000028
16815
Bacillota
TGA
Ser
>WENV182410061
OIFK01000028
16285
Bacillota
GCT
Ser
>WENV182410067
OIFK01000029
114359
Bacillota
TAG
Leu
>WENV182410165
OIFK01000236
114359
Bacillota
TAG
Leu
>WENV182410159
OIFK01000235
16834
Bacillota
GCT
Ser
>WENV182410141
OIFK01000168
150517
Bacillota
CAT
Met
>WENV182410192
OIFK01000384
150517
Bacillota
CAT
Met
>WENV182410312
OIFK01002065
243646
Bacillota
GTT
Asn
>WENV182410074
OIFK01000033
114002
Bacillota
CAA
Leu
>WENV182410199
OIFK01000439
338550
Bacillota
>WENV182410200
OIFK01000439
338550
Bacillota
>WENV182410275
OIFK01001078
37437
Bacillota
TAA
Leu
>WENV182410123
OIFK01000100
243612
Bacillota
TAC
Val
>WENV182410314
OIFK01002065
243612
Bacillota
TAC
Val
>WENV182410121
OIFK01000093
258936
Bacillota
GGT
Thr
>WENV182410140
OIFK01000168
340941
Bacillota
GCA
Cys
>WENV182410136
OIFK01000131
344320
Bacillota
GTT
Asn
>WENV182410154
OIFK01000223
147135
Bacillota
ACG
Arg
>WENV182410186
OIFK01000343
342895
Bacillota
CAT
Met
>WENV182410161
OIFK01000236
150597
Bacillota
TCT
Arg
>WENV182410168
OIFK01000236
150597
Bacillota
TCT
Arg
>WENV182410097
OIFK01000057
250349
Bacillota
GAA
Phe
>WENV182410272
OIFK01001078
250349
Bacillota
GAA
Phe
>WENV182410197
OIFK01000416
235701
Bacillota
TTT
Lys
>WENV182410236
OIFK01000623
146741
Bacillota
CAT
Met
>WENV182410069
OIFK01000029
258997
Bacillota
CTT
Lys
>WENV182410096
OIFK01000057
235197
Bacillota
GTC
Asp
>WENV182410271
OIFK01001078
235197
Bacillota
GTC
Asp
>WENV182410162
OIFK01000236
235905
Bacillota
GTG
His
>WENV182410167
OIFK01000236
411739
Bacillota
TCC
Gly
>WENV182410320
OIFK01002161
411739
Bacillota
TCC
Gly
>WENV182410128
OIFK01000118
235638
Bacillota
GAA
Phe
>WENV182410058
OIFK01000028
235506
Bacillota
TGC
Ala
>WENV182410164
OIFK01000236
237963
Bacillota
TTT
Lys
>WENV182410195
OIFK01000416
243613
Bacillota
GTG
His
>WENV182410319
OIFK01002121
152491
Bacillota
CAT
Met
>WENV182410265
OIFK01000990
338545
Bacillota
>WENV182410326
OIFK01002643
413657
Bacillota
CCC
Gly
>WENV182410237
OIFK01000623
163799
Bacillota
CAT
Met
>WENV182410322
OIFK01002223
351671
Bacillota
GTT
Asn
>WENV182410196
OIFK01000416
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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