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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182545517
OJBN01004960
46594
Gammaproteobacteria
GGA
Ser
>WENV182545200
OJBN01000006
245602
Gammaproteobacteria
TTT
Lys
>WENV182545509
OJBN01004668
148148
Gammaproteobacteria
GAC
Val
>WENV182545663
OJBN01011970
199268
Gammaproteobacteria
ACG
Arg
>WENV182545272
OJBN01000530
292565
Gammaproteobacteria
TTC
Glu
>WENV182545338
OJBN01001307
294663
Gammaproteobacteria
TTC
Glu
>WENV182545447
OJBN01003145
279906
Gammaproteobacteria
TGC
Ala
>WENV182545243
OJBN01000185
175661
Gammaproteobacteria
ACG
Arg
>WENV182545548
OJBN01006587
237421
Gammaproteobacteria
TGT
Thr
>WENV182545465
OJBN01003752
182592
Gammaproteobacteria
GAC
Val
>WENV182545680
OJBN01014217
16840
Gammaproteobacteria
GGA
Ser
>WENV182545262
OJBN01000408
198797
Gammaproteobacteria
TGG
Pro
>WENV182545425
OJBN01002484
190809
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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