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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182566745
OJEM01002135
312287
Gammaproteobacteria
TGT
Thr
>WENV182566734
OJEM01001744
313881
Gammaproteobacteria
GGC
Ala
>WENV182566756
OJEM01002228
14613
Gammaproteobacteria
TGA
Ser
>WENV182566683
OJEM01000089
279385
Gammaproteobacteria
TTT
Lys
>WENV182566723
OJEM01001057
279385
Gammaproteobacteria
TTT
Lys
>WENV182566835
OJEM01010904
279385
Gammaproteobacteria
TTT
Lys
>WENV182566794
OJEM01005393
145368
Gammaproteobacteria
CCT
Arg
>WENV182566761
OJEM01002507
17426
Gammaproteobacteria
GCT
Ser
>WENV182566672
OJEM01000004
147053
Gammaproteobacteria
GTT
Asn
>WENV182566688
OJEM01000145
147053
Gammaproteobacteria
GTT
Asn
>WENV182566691
OJEM01000180
145260
Gammaproteobacteria
CAT
Met
>WENV182566824
OJEM01008108
145367
Gammaproteobacteria
GGG
Pro
>WENV182566671
OJEM01000002
163940
Gammaproteobacteria
CCG
Arg
>WENV182566779
OJEM01003524
235452
Gammaproteobacteria
GAA
Phe
>WENV182566836
OJEM01011154
240619
Gammaproteobacteria
TGT
Thr
>WENV182566687
OJEM01000132
149036
Gammaproteobacteria
CCA
Trp
>WENV182566705
OJEM01000472
149036
Gammaproteobacteria
CCA
Trp
>WENV182566742
OJEM01002088
149036
Gammaproteobacteria
CCA
Trp
>WENV182566732
OJEM01001383
146791
Gammaproteobacteria
GAC
Val
>WENV182566810
OJEM01006488
145369
Gammaproteobacteria
CGG
Pro
>WENV182566878
OJEM01019844
174801
Gammaproteobacteria
TGG
Pro
>WENV182566707
OJEM01000533
45345
Gammaproteobacteria
GGA
Ser
>WENV182566785
OJEM01004311
45345
Gammaproteobacteria
GGA
Ser
>WENV182566695
OJEM01000246
340801
Gammaproteobacteria
CCT
Arg
>WENV182566684
OJEM01000106
289927
Gammaproteobacteria
GAA
Phe
>WENV182566764
OJEM01002520
289927
Gammaproteobacteria
GAA
Phe
>WENV182566841
OJEM01011751
277901
Gammaproteobacteria
TGT
Thr
>WENV182566676
OJEM01000021
149038
Gammaproteobacteria
TGG
Pro
>WENV182566733
OJEM01001529
149038
Gammaproteobacteria
TGG
Pro
>WENV182566710
OJEM01000614
59830
Gammaproteobacteria
CAA
Leu
>WENV182566857
OJEM01016315
237412
Gammaproteobacteria
TAC
Val
>WENV182566708
OJEM01000552
311863
Gammaproteobacteria
GGC
Ala
>WENV182566711
OJEM01000618
249882
Gammaproteobacteria
GTT
Asn
>WENV182566873
OJEM01019181
241136
Gammaproteobacteria
TTG
Gln
>WENV182566786
OJEM01004433
341850
Gammaproteobacteria
TTG
Gln
>WENV182566751
OJEM01002162
235886
Gammaproteobacteria
TTC
Glu
>WENV182566681
OJEM01000057
151889
Gammaproteobacteria
CAT
Met
>WENV182566722
OJEM01001023
238372
Gammaproteobacteria
CCT
Arg
>WENV182566714
OJEM01000664
59658
Gammaproteobacteria
CAA
Leu
>WENV182566680
OJEM01000056
149037
Gammaproteobacteria
GAC
Val
>WENV182566784
OJEM01004099
149037
Gammaproteobacteria
GAC
Val
>WENV182566792
OJEM01005390
240536
Gammaproteobacteria
TTT
Lys
>WENV182566793
OJEM01005390
240536
Gammaproteobacteria
TTT
Lys
>WENV182566699
OJEM01000338
175964
Gammaproteobacteria
CAT
Met
>WENV182566753
OJEM01002208
175964
Gammaproteobacteria
CAT
Met
>WENV182566749
OJEM01002147
236000
Gammaproteobacteria
GGT
Thr
>WENV182566758
OJEM01002300
59485
Gammaproteobacteria
CAG
Leu
>WENV182566674
OJEM01000021
288001
Gammaproteobacteria
TTG
Gln
>WENV182566839
OJEM01011154
239187
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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