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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182645237
OJLY01006099
37528
Bacillota
AAG
Leu
>WENV182645480
OJLY01028757
98147
Bacillota
TAG
Leu
>WENV182645218
OJLY01004862
338152
Bacillota
TTC
Glu
>WENV182645279
OJLY01007185
80951
Bacillota
CAG
Leu
>WENV182644842
OJLY01000555
294918
Bacillota
GAA
Phe
>WENV182645516
OJLY01033354
343542
Bacillota
CCG
Arg
>WENV182645427
OJLY01019666
429429
Bacillota
CCA
Trp
>WENV182645422
OJLY01019186
41154
Bacillota
TAA
Leu
>WENV182644879
OJLY01000599
362119
Bacillota
GCC
Gly
>WENV182645263
OJLY01006553
152125
Bacillota
GTT
Asn
>WENV182645287
OJLY01007778
412338
Bacillota
GCA
Cys
>WENV182645512
OJLY01032218
16437
Bacillota
GCT
Ser
>WENV182645217
OJLY01004862
287000
Bacillota
GTT
Asn
>WENV182645388
OJLY01015074
238415
Bacillota
CTT
Lys
>WENV182645340
OJLY01009994
37238
Bacillota
TAA
Leu
>WENV182645548
OJLY01052445
286963
Bacillota
CTT
Lys
>WENV182645187
OJLY01003885
238187
Bacillota
GGT
Thr
>WENV182645459
OJLY01026586
59274
Bacillota
CAA
Leu
>WENV182644770
OJLY01000331
292012
Bacillota
TGC
Ala
>WENV182644869
OJLY01000599
292012
Bacillota
TGC
Ala
>WENV182645066
OJLY01002075
147496
Bacillota
TCT
Arg
>WENV182645354
OJLY01011614
237388
Bacillota
GTG
His
>WENV182645115
OJLY01002816
191746
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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