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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182727999
OJPW01000705
144620
Thermodesulfobacteriota
GGG
Pro
>WENV182727668
OJPW01000067
254781
Thermodesulfobacteriota
GAA
Phe
>WENV182727869
OJPW01000347
156932
Thermodesulfobacteriota
ACG
Arg
>WENV182727708
OJPW01000106
345926
Thermodesulfobacteriota
CTG
Gln
>WENV182727687
OJPW01000086
151846
Thermodesulfobacteriota
CCA
Trp
>WENV182727611
OJPW01000025
248694
Thermodesulfobacteriota
CAT
Met
>WENV182728415
OJPW01006028
65703
Thermodesulfobacteriota
CAG
Leu
>WENV182727564
OJPW01000011
248819
Thermodesulfobacteriota
CGC
Ala
>WENV182727568
OJPW01000011
345151
Thermodesulfobacteriota
CCC
Gly
>WENV182727637
OJPW01000041
246751
Thermodesulfobacteriota
CAC
Val
>WENV182727686
OJPW01000086
266268
Thermodesulfobacteriota
TCC
Gly
>WENV182727895
OJPW01000402
128663
Thermodesulfobacteriota
CGG
Pro
>WENV182727755
OJPW01000160
173826
Thermodesulfobacteriota
CAT
Met
>WENV182727638
OJPW01000041
179273
Thermodesulfobacteriota
GTC
Asp
>WENV182727992
OJPW01000675
175662
Thermodesulfobacteriota
TCT
Arg
>WENV182727968
OJPW01000610
156452
Thermodesulfobacteriota
TTC
Glu
>WENV182728484
OJPW01008782
248567
Thermodesulfobacteriota
CTT
Lys
>WENV182727827
OJPW01000280
3406
Thermodesulfobacteriota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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