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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182799783
OJTW01000365
243647
Bacillota
TTT
Lys
>WENV182799794
OJTW01000517
16842
Bacillota
CGA
Ser
>WENV182799777
OJTW01000341
391536
Bacillota
TTC
Glu
>WENV182799843
OJTW01002091
23437
Bacillota
GGA
Ser
>WENV182799851
OJTW01002998
344203
Bacillota
GCC
Gly
>WENV182799846
OJTW01002295
16834
Bacillota
GCT
Ser
>WENV182799730
OJTW01000093
114002
Bacillota
CAA
Leu
>WENV182799725
OJTW01000079
37437
Bacillota
TAA
Leu
>WENV182799778
OJTW01000341
243612
Bacillota
TAC
Val
>WENV182799802
OJTW01000718
147135
Bacillota
ACG
Arg
>WENV182799766
OJTW01000216
342895
Bacillota
CAT
Met
>WENV182799832
OJTW01001354
314670
Bacillota
GAA
Phe
>WENV182799836
OJTW01001363
353847
Bacillota
CCT
Arg
>WENV182799805
OJTW01000893
194150
Bacillota
TGG
Pro
>WENV182799837
OJTW01001408
235197
Bacillota
GTC
Asp
>WENV182799849
OJTW01002998
201667
Bacillota
TCT
Arg
>WENV182799853
OJTW01002998
201667
Bacillota
TCT
Arg
>WENV182799781
OJTW01000365
243613
Bacillota
GTG
His
>WENV182799793
OJTW01000513
152491
Bacillota
CAT
Met
>WENV182799789
OJTW01000513
273029
Bacillota
TGT
Thr
>WENV182799792
OJTW01000513
281472
Bacillota
GGT
Thr
>WENV182799807
OJTW01000893
178024
Bacillota
TCT
Arg
>WENV182799852
OJTW01002998
411738
Bacillota
TCC
Gly
>WENV182799749
OJTW01000156
413657
Bacillota
CCC
Gly
>WENV182799776
OJTW01000341
287034
Bacillota
GTT
Asn
>WENV182799782
OJTW01000365
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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