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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182823015
OKBQ01001187
413566
Actinomycetota
CCC
Gly
>WENV182823001
OKBQ01000521
246840
Actinomycetota
CAC
Val
>WENV182823004
OKBQ01000755
96367
Actinomycetota
GTA
Tyr
>WENV182822992
OKBQ01000087
412871
Actinomycetota
GCA
Cys
>WENV182823013
OKBQ01001025
154640
Actinomycetota
CTT
Lys
>WENV182823006
OKBQ01000755
149271
Actinomycetota
CAT
Met
>WENV182823003
OKBQ01000730
246015
Actinomycetota
GTG
His
>WENV182823021
OKBQ01001425
246222
Actinomycetota
CCG
Arg
>WENV182822980
OKBQ01000024
37359
Actinomycetota
>WENV182822996
OKBQ01000241
149270
Actinomycetota
GTC
Asp
>WENV182823002
OKBQ01000544
345170
Actinomycetota
TTG
Gln
>WENV182823024
OKBQ01002365
152190
Actinomycetota
GAT
Ile
>WENV182823018
OKBQ01001383
240123
Actinomycetota
TAC
Val
>WENV182823023
OKBQ01002238
162402
Actinomycetota
GGG
Pro
>WENV182822994
OKBQ01000207
59716
Actinomycetota
CAG
Leu
>WENV182822999
OKBQ01000264
24777
Actinomycetota
GCT
Ser
>WENV182822998
OKBQ01000254
236216
Actinomycetota
GGC
Ala
>WENV182823011
OKBQ01000875
154637
Actinomycetota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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