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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182831846
OKEI01000040
24650
Bacillota
TAA
Leu
>WENV182831939
OKEI01001788
390153
Bacillota
GCC
Gly
>WENV182831875
OKEI01000078
267649
Bacillota
TAC
Val
>WENV182831877
OKEI01000078
267649
Bacillota
TAC
Val
>WENV182831936
OKEI01001386
154766
Bacillota
GTC
Asp
>WENV182831910
OKEI01000434
429429
Bacillota
CCA
Trp
>WENV182831873
OKEI01000066
313454
Bacillota
GAA
Phe
>WENV182831861
OKEI01000049
313164
Bacillota
TTT
Lys
>WENV182831874
OKEI01000066
313164
Bacillota
TTT
Lys
>WENV182831869
OKEI01000065
18852
Bacillota
GCT
Ser
>WENV182831858
OKEI01000049
147674
Bacillota
TCT
Arg
>WENV182831928
OKEI01001059
292012
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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