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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182848394
OKKH01000004
235146
Actinomycetota
CGT
Thr
>WENV182848410
OKKH01000018
235347
Actinomycetota
GGC
Ala
>WENV182848424
OKKH01000060
201717
Actinomycetota
CTT
Lys
>WENV182848505
OKKH01002333
340959
Actinomycetota
GTT
Asn
>WENV182848396
OKKH01000006
235194
Actinomycetota
GTG
His
>WENV182848392
OKKH01000004
273786
Actinomycetota
CGT
Thr
>WENV182848425
OKKH01000061
158720
Actinomycetota
ACG
Arg
>WENV182848387
OKKH01000001
411601
Actinomycetota
CCC
Gly
>WENV182848416
OKKH01000028
144826
Actinomycetota
GGG
Pro
>WENV182848397
OKKH01000007
23370
Actinomycetota
GCT
Ser
>WENV182848406
OKKH01000010
174149
Actinomycetota
GAT
Ile
>WENV182848427
OKKH01000074
338239
Actinomycetota
TTC
Glu
>WENV182848407
OKKH01000010
235174
Actinomycetota
TGC
Ala
>WENV182848395
OKKH01000005
121510
Actinomycetota
TAA
Leu
>WENV182848403
OKKH01000009
356045
Actinomycetota
GAC
Val
>WENV182848412
OKKH01000020
44855
Actinomycetota
TGA
Ser
>WENV182848404
OKKH01000009
235199
Actinomycetota
CAC
Val
>WENV182848398
OKKH01000007
44862
Actinomycetota
CGA
Ser
>WENV182848409
OKKH01000018
413665
Actinomycetota
TTG
Gln
>WENV182848401
OKKH01000009
254857
Actinomycetota
CCG
Arg
>WENV182848418
OKKH01000029
144700
Actinomycetota
CAT
Met
>WENV182848388
OKKH01000001
295695
Actinomycetota
CTC
Glu
>WENV182848389
OKKH01000001
338148
Actinomycetota
CTG
Gln
>WENV182848503
OKKH01002155
246222
Actinomycetota
CCG
Arg
>WENV182848447
OKKH01000281
235148
Actinomycetota
GTT
Asn
>WENV182848399
OKKH01000008
338238
Actinomycetota
CCA
Trp
>WENV182848414
OKKH01000021
144825
Actinomycetota
CAT
Met
>WENV182848467
OKKH01000596
151943
Actinomycetota
>WENV182848408
OKKH01000015
235348
Actinomycetota
CCT
Arg
>WENV182848393
OKKH01000004
113601
Actinomycetota
TAG
Leu
>WENV182848422
OKKH01000051
144595
Actinomycetota
CAA
Leu
>WENV182848484
OKKH01001249
153915
Actinomycetota
ACG
Arg
>WENV182848411
OKKH01000018
163764
Actinomycetota
TGG
Pro
>WENV182848434
OKKH01000138
17009
Actinomycetota
GAG
Leu
>WENV182848390
OKKH01000001
80622
Actinomycetota
CAG
Leu
>WENV182848426
OKKH01000070
243162
Actinomycetota
GTT
Asn
>WENV182848391
OKKH01000003
144660
Actinomycetota
TAC
Val
>WENV182848417
OKKH01000029
95593
Actinomycetota
>WENV182848419
OKKH01000034
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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