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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182865053
OKQH01001498
37110
Bacillota
TAA
Leu
>WENV182865055
OKQH01001498
194265
Bacillota
CAT
Met
>WENV182865036
OKQH01000514
16815
Bacillota
TGA
Ser
>WENV182864982
OKQH01000015
63862
Bacillota
CAG
Leu
>WENV182865038
OKQH01000555
95737
Bacillota
GTA
Tyr
>WENV182865067
OKQH01002894
114359
Bacillota
TAG
Leu
>WENV182865045
OKQH01000738
338550
Bacillota
>WENV182865046
OKQH01000738
338550
Bacillota
>WENV182865010
OKQH01000082
258936
Bacillota
GGT
Thr
>WENV182865057
OKQH01001933
344320
Bacillota
GTT
Asn
>WENV182864983
OKQH01000015
81172
Bacillota
>WENV182865034
OKQH01000406
198159
Bacillota
CAT
Met
>WENV182865051
OKQH01001060
235638
Bacillota
GAA
Phe
>WENV182865035
OKQH01000406
235506
Bacillota
TGC
Ala
>WENV182865052
OKQH01001060
429578
Bacillota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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