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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182907286
OKTE01009052
202812
Bacillota
CAT
Met
>WENV182907299
OKTE01009594
144612
Bacillota
TCT
Arg
>WENV182906932
OKTE01000149
154063
Bacillota
CGG
Pro
>WENV182907211
OKTE01004376
235098
Bacillota
GAC
Val
>WENV182907117
OKTE01001449
37071
Bacillota
TGA
Ser
>WENV182907357
OKTE01014717
307003
Bacillota
TGC
Ala
>WENV182906908
OKTE01000113
59312
Bacillota
CAG
Leu
>WENV182906951
OKTE01000191
338147
Bacillota
CTC
Glu
>WENV182906971
OKTE01000257
338147
Bacillota
CTC
Glu
>WENV182907164
OKTE01002476
338147
Bacillota
CTC
Glu
>WENV182907355
OKTE01014367
235150
Bacillota
TGC
Ala
>WENV182907383
OKTE01020902
281701
Bacillota
TGC
Ala
>WENV182907437
OKTE01036258
338143
Bacillota
CTC
Glu
>WENV182907010
OKTE01000439
235114
Bacillota
TTT
Lys
>WENV182907083
OKTE01001095
44859
Bacillota
AAG
Leu
>WENV182907401
OKTE01025990
11034
Bacillota
GGA
Ser
>WENV182907350
OKTE01013854
235079
Bacillota
GAA
Phe
>WENV182907245
OKTE01006431
338149
Bacillota
CTC
Glu
>WENV182907023
OKTE01000530
271471
Bacillota
GCC
Gly
>WENV182907438
OKTE01037354
245298
Bacillota
CGG
Pro
>WENV182907313
OKTE01010594
287000
Bacillota
GTT
Asn
>WENV182907386
OKTE01020910
413152
Bacillota
TCC
Gly
>WENV182907378
OKTE01020524
411547
Bacillota
CTG
Gln
>WENV182907056
OKTE01000834
263765
Bacillota
TAC
Val
>WENV182907316
OKTE01010777
235095
Bacillota
GGT
Thr
>WENV182907309
OKTE01010271
411549
Bacillota
TTG
Gln
>WENV182906921
OKTE01000134
235142
Bacillota
CTT
Lys
>WENV182907248
OKTE01006687
245386
Bacillota
CCA
Trp
>WENV182907212
OKTE01004380
148188
Bacillota
CCG
Arg
>WENV182906900
OKTE01000100
163943
Bacillota
GTC
Asp
>WENV182907237
OKTE01005810
235124
Bacillota
TGG
Pro
>WENV182907288
OKTE01009126
338129
Bacillota
TGT
Thr
>WENV182907057
OKTE01000834
157838
Bacillota
GTC
Asp
>WENV182907414
OKTE01029099
320668
Bacillota
CTT
Lys
>WENV182907246
OKTE01006431
144621
Bacillota
GTT
Asn
>WENV182907009
OKTE01000439
235113
Bacillota
GAA
Phe
>WENV182907290
OKTE01009244
58712
Bacillota
CAG
Leu
>WENV182907277
OKTE01008401
144594
Bacillota
CAC
Val
>WENV182906954
OKTE01000201
95563
Bacillota
GTA
Tyr
>WENV182907007
OKTE01000425
338128
Bacillota
TTC
Glu
>WENV182907099
OKTE01001281
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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