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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183007737
OLDJ01001979
24650
Bacillota
TAA
Leu
>WENV183007754
OLDJ01002750
243647
Bacillota
TTT
Lys
>WENV183007594
OLDJ01000078
16842
Bacillota
CGA
Ser
>WENV183007762
OLDJ01002958
338152
Bacillota
TTC
Glu
>WENV183007813
OLDJ01006246
246023
Bacillota
TGC
Ala
>WENV183007869
OLDJ01016349
235137
Bacillota
TGC
Ala
>WENV183007790
OLDJ01004717
341763
Bacillota
CTC
Glu
>WENV183007563
OLDJ01000001
302152
Bacillota
CTT
Lys
>WENV183007609
OLDJ01000208
144668
Bacillota
GTC
Asp
>WENV183007706
OLDJ01001618
429429
Bacillota
CCA
Trp
>WENV183007868
OLDJ01016199
16834
Bacillota
GCT
Ser
>WENV183007753
OLDJ01002750
243646
Bacillota
GTT
Asn
>WENV183007636
OLDJ01000318
114002
Bacillota
CAA
Leu
>WENV183007585
OLDJ01000050
37437
Bacillota
TAA
Leu
>WENV183007827
OLDJ01008465
37437
Bacillota
TAA
Leu
>WENV183007568
OLDJ01000005
96360
Bacillota
GTA
Tyr
>WENV183007756
OLDJ01002750
243612
Bacillota
TAC
Val
>WENV183007852
OLDJ01012046
37269
Bacillota
TGA
Ser
>WENV183007761
OLDJ01002958
287000
Bacillota
GTT
Asn
>WENV183007812
OLDJ01006246
201704
Bacillota
GAT
Ile
>WENV183007810
OLDJ01005762
147135
Bacillota
ACG
Arg
>WENV183007596
OLDJ01000174
18852
Bacillota
GCT
Ser
>WENV183007811
OLDJ01006177
18852
Bacillota
GCT
Ser
>WENV183007629
OLDJ01000250
194150
Bacillota
TGG
Pro
>WENV183007587
OLDJ01000063
250349
Bacillota
GAA
Phe
>WENV183007602
OLDJ01000193
235701
Bacillota
TTT
Lys
>WENV183007625
OLDJ01000209
339391
Bacillota
TTC
Glu
>WENV183007615
OLDJ01000208
235127
Bacillota
TTT
Lys
>WENV183007586
OLDJ01000063
235197
Bacillota
GTC
Asp
>WENV183007583
OLDJ01000050
368876
Bacillota
GCC
Gly
>WENV183007668
OLDJ01000678
412076
Bacillota
TCC
Gly
>WENV183007600
OLDJ01000193
243613
Bacillota
GTG
His
>WENV183007665
OLDJ01000660
152491
Bacillota
CAT
Met
>WENV183007698
OLDJ01001164
59664
Bacillota
CAG
Leu
>WENV183007661
OLDJ01000660
273029
Bacillota
TGT
Thr
>WENV183007664
OLDJ01000660
281472
Bacillota
GGT
Thr
>WENV183007631
OLDJ01000250
178024
Bacillota
TCT
Arg
>WENV183007632
OLDJ01000258
413657
Bacillota
CCC
Gly
>WENV183007624
OLDJ01000209
7065
Bacillota
GCT
Ser
>WENV183007601
OLDJ01000193
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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