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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183018148
OLEY01000128
24650
Bacillota
TAA
Leu
>WENV183018135
OLEY01000084
16842
Bacillota
CGA
Ser
>WENV183018393
OLEY01011811
202812
Bacillota
CAT
Met
>WENV183018225
OLEY01001071
267649
Bacillota
TAC
Val
>WENV183018289
OLEY01002571
246023
Bacillota
TGC
Ala
>WENV183018236
OLEY01001419
341763
Bacillota
CTC
Glu
>WENV183018103
OLEY01000002
302152
Bacillota
CTT
Lys
>WENV183018197
OLEY01000704
401434
Bacillota
TTG
Gln
>WENV183018268
OLEY01002165
429429
Bacillota
CCA
Trp
>WENV183018115
OLEY01000035
313454
Bacillota
GAA
Phe
>WENV183018146
OLEY01000124
16834
Bacillota
GCT
Ser
>WENV183018376
OLEY01010530
243646
Bacillota
GTT
Asn
>WENV183018394
OLEY01012006
243646
Bacillota
GTT
Asn
>WENV183018145
OLEY01000122
114002
Bacillota
CAA
Leu
>WENV183018245
OLEY01001569
37437
Bacillota
TAA
Leu
>WENV183018125
OLEY01000050
96360
Bacillota
GTA
Tyr
>WENV183018351
OLEY01006093
114440
Bacillota
TAG
Leu
>WENV183018318
OLEY01003942
316443
Bacillota
GTC
Asp
>WENV183018406
OLEY01015187
37269
Bacillota
TGA
Ser
>WENV183018288
OLEY01002571
201704
Bacillota
GAT
Ile
>WENV183018140
OLEY01000097
147135
Bacillota
ACG
Arg
>WENV183018116
OLEY01000035
313164
Bacillota
TTT
Lys
>WENV183018320
OLEY01003942
109476
Bacillota
TAG
Leu
>WENV183018280
OLEY01002377
194150
Bacillota
TGG
Pro
>WENV183018259
OLEY01001903
235701
Bacillota
TTT
Lys
>WENV183018300
OLEY01003045
339391
Bacillota
TTC
Glu
>WENV183018257
OLEY01001903
243613
Bacillota
GTG
His
>WENV183018153
OLEY01000154
152491
Bacillota
CAT
Met
>WENV183018149
OLEY01000154
273029
Bacillota
TGT
Thr
>WENV183018152
OLEY01000154
281472
Bacillota
GGT
Thr
>WENV183018282
OLEY01002377
178024
Bacillota
TCT
Arg
>WENV183018250
OLEY01001719
413657
Bacillota
CCC
Gly
>WENV183018299
OLEY01003045
7065
Bacillota
GCT
Ser
>WENV183018258
OLEY01001903
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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