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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183037799
OLGA01082091
202812
Bacillota
CAT
Met
>WENV183037149
OLGA01009103
309417
Bacillota
GGC
Ala
>WENV183036843
OLGA01003743
158247
Bacillota
>WENV183036754
OLGA01003021
144612
Bacillota
TCT
Arg
>WENV183036963
OLGA01005194
235134
Bacillota
GAA
Phe
>WENV183037774
OLGA01075065
156189
Bacillota
GAT
Ile
>WENV183037077
OLGA01007312
235098
Bacillota
GAC
Val
>WENV183037448
OLGA01025098
235098
Bacillota
GAC
Val
>WENV183037825
OLGA01090043
338152
Bacillota
TTC
Glu
>WENV183036393
OLGA01000865
148239
Bacillota
TCT
Arg
>WENV183037186
OLGA01010241
44854
Bacillota
TGA
Ser
>WENV183037719
OLGA01060869
144577
Bacillota
GAT
Ile
>WENV183036175
OLGA01000263
37071
Bacillota
TGA
Ser
>WENV183036363
OLGA01000761
304022
Bacillota
GCC
Gly
>WENV183037375
OLGA01019983
304022
Bacillota
GCC
Gly
>WENV183037682
OLGA01052891
347827
Bacillota
TTC
Glu
>WENV183037789
OLGA01079022
246023
Bacillota
TGC
Ala
>WENV183037528
OLGA01032760
307003
Bacillota
TGC
Ala
>WENV183036680
OLGA01002416
59312
Bacillota
CAG
Leu
>WENV183036616
OLGA01002047
338147
Bacillota
CTC
Glu
>WENV183036689
OLGA01002483
338147
Bacillota
CTC
Glu
>WENV183037463
OLGA01026241
235150
Bacillota
TGC
Ala
>WENV183036460
OLGA01001181
340802
Bacillota
TTG
Gln
>WENV183036416
OLGA01000927
235114
Bacillota
TTT
Lys
>WENV183036931
OLGA01004730
144668
Bacillota
GTC
Asp
>WENV183037102
OLGA01007750
429429
Bacillota
CCA
Trp
>WENV183036932
OLGA01004730
41154
Bacillota
TAA
Leu
>WENV183036103
OLGA01000159
44859
Bacillota
AAG
Leu
>WENV183036679
OLGA01002416
44859
Bacillota
AAG
Leu
>WENV183037019
OLGA01006118
11034
Bacillota
GGA
Ser
>WENV183037125
OLGA01008418
11034
Bacillota
GGA
Ser
>WENV183037376
OLGA01019983
235117
Bacillota
TAC
Val
>WENV183036394
OLGA01000865
156937
Bacillota
GTG
His
>WENV183037718
OLGA01060869
235087
Bacillota
TGC
Ala
>WENV183037648
OLGA01048869
173314
Bacillota
GAT
Ile
>WENV183036975
OLGA01005391
338149
Bacillota
CTC
Glu
>WENV183037119
OLGA01008284
245298
Bacillota
CGG
Pro
>WENV183036136
OLGA01000216
287000
Bacillota
GTT
Asn
>WENV183036137
OLGA01000216
287000
Bacillota
GTT
Asn
>WENV183037131
OLGA01008486
169968
Bacillota
CAT
Met
>WENV183035963
OLGA01000037
152149
Bacillota
GTG
His
>WENV183037788
OLGA01079022
201704
Bacillota
GAT
Ile
>WENV183037824
OLGA01089575
152492
Bacillota
GGG
Pro
>WENV183037613
OLGA01043467
153911
Bacillota
GAT
Ile
>WENV183036414
OLGA01000927
144610
Bacillota
GTG
His
>WENV183036964
OLGA01005194
240017
Bacillota
GCC
Gly
>WENV183036910
OLGA01004388
411547
Bacillota
CTG
Gln
>WENV183037118
OLGA01008284
411547
Bacillota
CTG
Gln
>WENV183037768
OLGA01072632
147684
Bacillota
ACG
Arg
>WENV183037187
OLGA01010241
4624
Bacillota
GCT
Ser
>WENV183036526
OLGA01001562
412387
Bacillota
GCA
Cys
>WENV183037200
OLGA01010691
248683
Bacillota
TTT
Lys
>WENV183037022
OLGA01006167
235095
Bacillota
GGT
Thr
>WENV183036815
OLGA01003560
419639
Bacillota
GCA
Cys
>WENV183036758
OLGA01003068
411549
Bacillota
TTG
Gln
>WENV183036102
OLGA01000157
235142
Bacillota
CTT
Lys
>WENV183037072
OLGA01007191
148188
Bacillota
CCG
Arg
>WENV183037239
OLGA01012888
148188
Bacillota
CCG
Arg
>WENV183036829
OLGA01003706
163943
Bacillota
GTC
Asp
>WENV183036928
OLGA01004697
235124
Bacillota
TGG
Pro
>WENV183037227
OLGA01012150
338129
Bacillota
TGT
Thr
>WENV183037486
OLGA01027893
157838
Bacillota
GTC
Asp
>WENV183036380
OLGA01000821
292519
Bacillota
CAT
Met
>WENV183036559
OLGA01001727
144583
Bacillota
ACG
Arg
>WENV183037822
OLGA01089079
320668
Bacillota
CTT
Lys
>WENV183036020
OLGA01000062
236037
Bacillota
GTG
His
>WENV183036976
OLGA01005391
144621
Bacillota
GTT
Asn
>WENV183036125
OLGA01000198
235113
Bacillota
GAA
Phe
>WENV183037551
OLGA01035389
243098
Bacillota
GGT
Thr
>WENV183037100
OLGA01007738
58712
Bacillota
CAG
Leu
>WENV183037286
OLGA01015230
245296
Bacillota
CCC
Gly
>WENV183036943
OLGA01004961
272992
Bacillota
CTT
Lys
>WENV183037151
OLGA01009196
272992
Bacillota
CTT
Lys
>WENV183037323
OLGA01017033
272992
Bacillota
CTT
Lys
>WENV183036814
OLGA01003560
344240
Bacillota
GCC
Gly
>WENV183037597
OLGA01041142
196632
Bacillota
GTC
Asp
>WENV183036765
OLGA01003143
248965
Bacillota
GCC
Gly
>WENV183036025
OLGA01000067
178024
Bacillota
TCT
Arg
>WENV183037282
OLGA01015166
299139
Bacillota
TGC
Ala
>WENV183037647
OLGA01048869
299139
Bacillota
TGC
Ala
>WENV183037707
OLGA01057035
299139
Bacillota
TGC
Ala
>WENV183036973
OLGA01005374
144594
Bacillota
CAC
Val
>WENV183036390
OLGA01000859
95563
Bacillota
GTA
Tyr
>WENV183036530
OLGA01001581
338128
Bacillota
TTC
Glu
>WENV183036811
OLGA01003543
338128
Bacillota
TTC
Glu
>WENV183037598
OLGA01041142
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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