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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183055417
OLHB01004810
235887
Gammaproteobacteria
GTG
His
>WENV183055429
OLHB01005552
146646
Gammaproteobacteria
TGG
Pro
>WENV183055393
OLHB01001683
149065
Gammaproteobacteria
CCA
Trp
>WENV183055402
OLHB01004099
113631
Gammaproteobacteria
GTA
Tyr
>WENV183055392
OLHB01001541
149036
Gammaproteobacteria
CCA
Trp
>WENV183055403
OLHB01004099
338534
Gammaproteobacteria
TCC
Gly
>WENV183055428
OLHB01005552
311624
Gammaproteobacteria
GTG
His
>WENV183055375
OLHB01000207
249995
Gammaproteobacteria
TTT
Lys
>WENV183055377
OLHB01000621
277901
Gammaproteobacteria
TGT
Thr
>WENV183055406
OLHB01004503
149038
Gammaproteobacteria
TGG
Pro
>WENV183055422
OLHB01005401
148442
Gammaproteobacteria
ACG
Arg
>WENV183055387
OLHB01001348
240084
Gammaproteobacteria
GGT
Thr
>WENV183055391
OLHB01001348
240084
Gammaproteobacteria
GGT
Thr
>WENV183055426
OLHB01005513
77137
Gammaproteobacteria
TAA
Leu
>WENV183055420
OLHB01005330
241136
Gammaproteobacteria
TTG
Gln
>WENV183055412
OLHB01004612
341850
Gammaproteobacteria
TTG
Gln
>WENV183055413
OLHB01004612
341850
Gammaproteobacteria
TTG
Gln
>WENV183055414
OLHB01004612
341850
Gammaproteobacteria
TTG
Gln
>WENV183055407
OLHB01004503
154796
Gammaproteobacteria
TCT
Arg
>WENV183055396
OLHB01002929
149037
Gammaproteobacteria
GAC
Val
>WENV183055427
OLHB01005552
182279
Gammaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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