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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183063455
OLIG01000052
147158
Actinomycetota
TTT
Lys
>WENV183063442
OLIG01000011
290172
Actinomycetota
TGC
Ala
>WENV183063457
OLIG01000052
147155
Actinomycetota
GTC
Asp
>WENV183063494
OLIG01000308
235606
Actinomycetota
GGT
Thr
>WENV183063513
OLIG01001345
3286
Actinomycetota
>WENV183063506
OLIG01000749
37092
Actinomycetota
GGA
Ser
>WENV183063463
OLIG01000071
237816
Actinomycetota
GGT
Thr
>WENV183063484
OLIG01000144
304559
Actinomycetota
GCC
Gly
>WENV183063436
OLIG01000006
37209
Actinomycetota
GAG
Leu
>WENV183063470
OLIG01000102
147157
Actinomycetota
TAC
Val
>WENV183063502
OLIG01000579
299116
Actinomycetota
TGT
Thr
>WENV183063449
OLIG01000040
80900
Actinomycetota
TGA
Ser
>WENV183063495
OLIG01000308
338474
Actinomycetota
CAT
Met
>WENV183063486
OLIG01000144
339641
Actinomycetota
GAC
Val
>WENV183063503
OLIG01000700
235574
Actinomycetota
TTC
Glu
>WENV183063497
OLIG01000432
16526
Actinomycetota
CGA
Ser
>WENV183063481
OLIG01000134
147348
Actinomycetota
TAA
Leu
>WENV183063445
OLIG01000028
428901
Actinomycetota
CCC
Gly
>WENV183063488
OLIG01000208
235384
Actinomycetota
GTG
His
>WENV183063460
OLIG01000064
372831
Actinomycetota
CTG
Gln
>WENV183063505
OLIG01000700
238648
Actinomycetota
GAA
Phe
>WENV183063483
OLIG01000141
289966
Actinomycetota
ACG
Arg
>WENV183063504
OLIG01000700
149270
Actinomycetota
GTC
Asp
>WENV183063467
OLIG01000080
237815
Actinomycetota
CTT
Lys
>WENV183063499
OLIG01000482
155153
Actinomycetota
CAT
Met
>WENV183063459
OLIG01000053
80899
Actinomycetota
CAG
Leu
>WENV183063512
OLIG01001333
338387
Actinomycetota
>WENV183063458
OLIG01000052
147156
Actinomycetota
GAA
Phe
>WENV183063500
OLIG01000501
235609
Actinomycetota
CTT
Lys
>WENV183063464
OLIG01000071
338489
Actinomycetota
CAT
Met
>WENV183063432
OLIG01000002
237803
Actinomycetota
CGT
Thr
>WENV183063461
OLIG01000064
237812
Actinomycetota
CTC
Glu
>WENV183063448
OLIG01000031
45149
Actinomycetota
CGA
Ser
>WENV183063462
OLIG01000071
96033
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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