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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183065538
OLIJ01000241
243647
Bacillota
TTT
Lys
>WENV183065557
OLIJ01000297
243647
Bacillota
TTT
Lys
>WENV183065584
OLIJ01000749
26899
Bacillota
GGA
Ser
>WENV183065754
OLIJ01014064
163776
Bacillota
TGG
Pro
>WENV183065452
OLIJ01000088
16842
Bacillota
CGA
Ser
>WENV183065520
OLIJ01000207
235693
Bacillota
GGT
Thr
>WENV183065685
OLIJ01006110
235287
Bacillota
TTT
Lys
>WENV183065692
OLIJ01006110
235287
Bacillota
TTT
Lys
>WENV183065790
OLIJ01019275
246392
Bacillota
GTT
Asn
>WENV183065777
OLIJ01016631
152047
Bacillota
GGG
Pro
>WENV183065673
OLIJ01004691
345329
Bacillota
TTC
Glu
>WENV183065583
OLIJ01000718
419288
Bacillota
GGT
Thr
>WENV183065718
OLIJ01008312
412107
Bacillota
TCC
Gly
>WENV183065672
OLIJ01004691
145606
Bacillota
GTC
Asp
>WENV183065387
OLIJ01000037
16834
Bacillota
GCT
Ser
>WENV183065740
OLIJ01011550
16834
Bacillota
GCT
Ser
>WENV183065607
OLIJ01001415
243646
Bacillota
GTT
Asn
>WENV183065684
OLIJ01006110
235290
Bacillota
TTG
Gln
>WENV183065480
OLIJ01000112
114002
Bacillota
CAA
Leu
>WENV183065751
OLIJ01013744
114002
Bacillota
CAA
Leu
>WENV183065462
OLIJ01000094
37437
Bacillota
TAA
Leu
>WENV183065656
OLIJ01003506
37437
Bacillota
TAA
Leu
>WENV183065502
OLIJ01000159
243612
Bacillota
TAC
Val
>WENV183065540
OLIJ01000241
243612
Bacillota
TAC
Val
>WENV183065577
OLIJ01000701
243612
Bacillota
TAC
Val
>WENV183065581
OLIJ01000701
243612
Bacillota
TAC
Val
>WENV183065589
OLIJ01001009
243612
Bacillota
TAC
Val
>WENV183065620
OLIJ01001976
243612
Bacillota
TAC
Val
>WENV183065688
OLIJ01006110
144766
Bacillota
CAT
Met
>WENV183065735
OLIJ01010082
37551
Bacillota
CGA
Ser
>WENV183065723
OLIJ01008312
115075
Bacillota
TAG
Leu
>WENV183065693
OLIJ01006110
411585
Bacillota
GCA
Cys
>WENV183065505
OLIJ01000163
147135
Bacillota
ACG
Arg
>WENV183065559
OLIJ01000321
147135
Bacillota
ACG
Arg
>WENV183065721
OLIJ01008312
339364
Bacillota
TTG
Gln
>WENV183065671
OLIJ01004691
263765
Bacillota
TAC
Val
>WENV183065372
OLIJ01000033
342895
Bacillota
CAT
Met
>WENV183065792
OLIJ01019275
248683
Bacillota
TTT
Lys
>WENV183065786
OLIJ01018958
150597
Bacillota
TCT
Arg
>WENV183065459
OLIJ01000094
250349
Bacillota
GAA
Phe
>WENV183065472
OLIJ01000105
250349
Bacillota
GAA
Phe
>WENV183065653
OLIJ01003506
250349
Bacillota
GAA
Phe
>WENV183065755
OLIJ01014064
146741
Bacillota
CAT
Met
>WENV183065691
OLIJ01006110
144767
Bacillota
GTG
His
>WENV183065458
OLIJ01000094
235197
Bacillota
GTC
Asp
>WENV183065471
OLIJ01000105
235197
Bacillota
GTC
Asp
>WENV183065516
OLIJ01000185
235197
Bacillota
GTC
Asp
>WENV183065652
OLIJ01003506
235197
Bacillota
GTC
Asp
>WENV183065689
OLIJ01006110
144764
Bacillota
CAT
Met
>WENV183065785
OLIJ01018958
411739
Bacillota
TCC
Gly
>WENV183065720
OLIJ01008312
237287
Bacillota
GTG
His
>WENV183065690
OLIJ01006110
163753
Bacillota
TGG
Pro
>WENV183065555
OLIJ01000297
243613
Bacillota
GTG
His
>WENV183065747
OLIJ01012577
148495
Bacillota
TCT
Arg
>WENV183065719
OLIJ01008312
145469
Bacillota
TCT
Arg
>WENV183065521
OLIJ01000207
152491
Bacillota
CAT
Met
>WENV183065731
OLIJ01009393
347434
Bacillota
CTC
Glu
>WENV183065753
OLIJ01014064
145468
Bacillota
ACG
Arg
>WENV183065481
OLIJ01000118
413657
Bacillota
CCC
Gly
>WENV183065556
OLIJ01000297
343027
Bacillota
TTG
Gln
>WENV183065633
OLIJ01002726
338131
Bacillota
GCC
Gly
>WENV183065758
OLIJ01014363
113740
Bacillota
GTA
Tyr
>WENV183065722
OLIJ01008312
237283
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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