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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183101015
OLNG01001784
24650
Bacillota
TAA
Leu
>WENV183100509
OLNG01000063
37213
Bacillota
TGA
Ser
>WENV183101025
OLNG01001843
37213
Bacillota
TGA
Ser
>WENV183101128
OLNG01004154
235134
Bacillota
GAA
Phe
>WENV183101052
OLNG01002351
339890
Bacillota
TTG
Gln
>WENV183100570
OLNG01000111
338152
Bacillota
TTC
Glu
>WENV183100696
OLNG01000243
23769
Bacillota
TAA
Leu
>WENV183100526
OLNG01000076
37071
Bacillota
TGA
Ser
>WENV183100835
OLNG01000589
411591
Bacillota
GGT
Thr
>WENV183100537
OLNG01000086
59312
Bacillota
CAG
Leu
>WENV183100658
OLNG01000194
59312
Bacillota
CAG
Leu
>WENV183100659
OLNG01000194
59312
Bacillota
CAG
Leu
>WENV183100744
OLNG01000327
59312
Bacillota
CAG
Leu
>WENV183101078
OLNG01002785
59312
Bacillota
CAG
Leu
>WENV183100483
OLNG01000045
338147
Bacillota
CTC
Glu
>WENV183100764
OLNG01000358
338147
Bacillota
CTC
Glu
>WENV183100774
OLNG01000378
338147
Bacillota
CTC
Glu
>WENV183100839
OLNG01000601
338147
Bacillota
CTC
Glu
>WENV183100905
OLNG01000896
338147
Bacillota
CTC
Glu
>WENV183100906
OLNG01000896
338147
Bacillota
CTC
Glu
>WENV183101156
OLNG01005042
338147
Bacillota
CTC
Glu
>WENV183100770
OLNG01000371
155273
Bacillota
CAT
Met
>WENV183101198
OLNG01007876
238494
Bacillota
GGC
Ala
>WENV183101147
OLNG01004485
235294
Bacillota
TGC
Ala
>WENV183101185
OLNG01006430
235294
Bacillota
TGC
Ala
>WENV183101146
OLNG01004460
147758
Bacillota
CGG
Pro
>WENV183101139
OLNG01004460
237265
Bacillota
TAC
Val
>WENV183100743
OLNG01000327
44859
Bacillota
AAG
Leu
>WENV183101110
OLNG01003407
235117
Bacillota
TAC
Val
>WENV183101259
OLNG01017336
247057
Bacillota
TGC
Ala
>WENV183101109
OLNG01003407
338440
Bacillota
TTC
Glu
>WENV183100671
OLNG01000208
156937
Bacillota
GTG
His
>WENV183101055
OLNG01002363
339935
Bacillota
GTT
Asn
>WENV183101080
OLNG01002811
16266
Bacillota
GCT
Ser
>WENV183100660
OLNG01000196
37269
Bacillota
TGA
Ser
>WENV183100401
OLNG01000012
413152
Bacillota
TCC
Gly
>WENV183100665
OLNG01000202
152492
Bacillota
GGG
Pro
>WENV183100670
OLNG01000207
152492
Bacillota
GGG
Pro
>WENV183100876
OLNG01000758
152492
Bacillota
GGG
Pro
>WENV183101153
OLNG01004804
152492
Bacillota
GGG
Pro
>WENV183101280
OLNG01027028
59705
Bacillota
CAG
Leu
>WENV183100700
OLNG01000250
240017
Bacillota
GCC
Gly
>WENV183100462
OLNG01000032
147684
Bacillota
ACG
Arg
>WENV183100806
OLNG01000450
147684
Bacillota
ACG
Arg
>WENV183100820
OLNG01000539
147684
Bacillota
ACG
Arg
>WENV183100830
OLNG01000567
147684
Bacillota
ACG
Arg
>WENV183100989
OLNG01001427
147684
Bacillota
ACG
Arg
>WENV183101007
OLNG01001682
147684
Bacillota
ACG
Arg
>WENV183101124
OLNG01003844
412387
Bacillota
GCA
Cys
>WENV183100917
OLNG01000938
412387
Bacillota
GCA
Cys
>WENV183101172
OLNG01005813
411584
Bacillota
TCC
Gly
>WENV183101140
OLNG01004460
238497
Bacillota
TTT
Lys
>WENV183100862
OLNG01000685
239832
Bacillota
TGT
Thr
>WENV183101286
OLNG01027836
152151
Bacillota
TCT
Arg
>WENV183101175
OLNG01005813
235289
Bacillota
GTT
Asn
>WENV183100705
OLNG01000263
235142
Bacillota
CTT
Lys
>WENV183100842
OLNG01000614
235142
Bacillota
CTT
Lys
>WENV183100720
OLNG01000293
235127
Bacillota
TTT
Lys
>WENV183100722
OLNG01000293
235127
Bacillota
TTT
Lys
>WENV183101053
OLNG01002351
235127
Bacillota
TTT
Lys
>WENV183101050
OLNG01002351
147674
Bacillota
TCT
Arg
>WENV183100446
OLNG01000024
249522
Bacillota
TAC
Val
>WENV183100643
OLNG01000176
249522
Bacillota
TAC
Val
>WENV183100699
OLNG01000250
249522
Bacillota
TAC
Val
>WENV183100860
OLNG01000680
144672
Bacillota
TCT
Arg
>WENV183101095
OLNG01003267
247734
Bacillota
TGC
Ala
>WENV183101197
OLNG01007876
238493
Bacillota
CGC
Ala
>WENV183101255
OLNG01016097
412403
Bacillota
CCC
Gly
>WENV183100734
OLNG01000311
238974
Bacillota
GAA
Phe
>WENV183100523
OLNG01000076
235113
Bacillota
GAA
Phe
>WENV183100793
OLNG01000418
148495
Bacillota
TCT
Arg
>WENV183101144
OLNG01004460
145468
Bacillota
ACG
Arg
>WENV183100773
OLNG01000378
95563
Bacillota
GTA
Tyr
>WENV183100453
OLNG01000027
114075
Bacillota
TAG
Leu
>WENV183100823
OLNG01000552
119513
Bacillota
CAA
Leu
>WENV183100885
OLNG01000801
238945
Bacillota
GCC
Gly
>WENV183100945
OLNG01001098
238945
Bacillota
GCC
Gly
>WENV183101065
OLNG01002554
238945
Bacillota
GCC
Gly
>WENV183101154
OLNG01004819
238945
Bacillota
GCC
Gly
>WENV183101155
OLNG01004819
238945
Bacillota
GCC
Gly
>WENV183101129
OLNG01004154
249259
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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