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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183122922
OLNW01000105
235146
Actinomycetota
CGT
Thr
>WENV183123057
OLNW01000226
119475
Actinomycetota
TAA
Leu
>WENV183122763
OLNW01000034
235347
Actinomycetota
GGC
Ala
>WENV183122764
OLNW01000034
235347
Actinomycetota
GGC
Ala
>WENV183122934
OLNW01000112
166493
Actinomycetota
CTT
Lys
>WENV183123289
OLNW01000485
235153
Actinomycetota
CCT
Arg
>WENV183122634
OLNW01000004
37070
Actinomycetota
CGA
Ser
>WENV183122781
OLNW01000043
235092
Actinomycetota
CCG
Arg
>WENV183122968
OLNW01000142
235194
Actinomycetota
GTG
His
>WENV183122920
OLNW01000105
273786
Actinomycetota
CGT
Thr
>WENV183123453
OLNW01000858
158720
Actinomycetota
ACG
Arg
>WENV183123454
OLNW01000858
158720
Actinomycetota
ACG
Arg
>WENV183122874
OLNW01000075
245301
Actinomycetota
GCC
Gly
>WENV183122876
OLNW01000075
245301
Actinomycetota
GCC
Gly
>WENV183122877
OLNW01000075
245301
Actinomycetota
GCC
Gly
>WENV183122749
OLNW01000029
411601
Actinomycetota
CCC
Gly
>WENV183122963
OLNW01000133
144826
Actinomycetota
GGG
Pro
>WENV183122682
OLNW01000010
23370
Actinomycetota
GCT
Ser
>WENV183123166
OLNW01000327
174149
Actinomycetota
GAT
Ile
>WENV183122677
OLNW01000010
338239
Actinomycetota
TTC
Glu
>WENV183122635
OLNW01000004
16219
Actinomycetota
GCT
Ser
>WENV183122710
OLNW01000017
235174
Actinomycetota
TGC
Ala
>WENV183123167
OLNW01000327
235174
Actinomycetota
TGC
Ala
>WENV183122707
OLNW01000017
235101
Actinomycetota
TTT
Lys
>WENV183122760
OLNW01000034
121510
Actinomycetota
TAA
Leu
>WENV183122918
OLNW01000105
356045
Actinomycetota
GAC
Val
>WENV183122632
OLNW01000004
144625
Actinomycetota
GTC
Asp
>WENV183122642
OLNW01000004
144625
Actinomycetota
GTC
Asp
>WENV183123511
OLNW01001047
153948
Actinomycetota
GGG
Pro
>WENV183122684
OLNW01000010
44855
Actinomycetota
TGA
Ser
>WENV183122987
OLNW01000156
145345
Actinomycetota
TAC
Val
>WENV183122919
OLNW01000105
235199
Actinomycetota
CAC
Val
>WENV183122683
OLNW01000010
44862
Actinomycetota
CGA
Ser
>WENV183122762
OLNW01000034
413665
Actinomycetota
TTG
Gln
>WENV183122916
OLNW01000105
254857
Actinomycetota
CCG
Arg
>WENV183122801
OLNW01000046
16223
Actinomycetota
GAG
Leu
>WENV183122643
OLNW01000004
144593
Actinomycetota
TAT
Ile
>WENV183122681
OLNW01000010
144700
Actinomycetota
CAT
Met
>WENV183123087
OLNW01000244
144636
Actinomycetota
GAT
Ile
>WENV183123089
OLNW01000244
144636
Actinomycetota
GAT
Ile
>WENV183122750
OLNW01000029
243671
Actinomycetota
CTC
Glu
>WENV183122638
OLNW01000004
98279
Actinomycetota
GTA
Tyr
>WENV183122751
OLNW01000029
338148
Actinomycetota
CTG
Gln
>WENV183122938
OLNW01000115
338148
Actinomycetota
CTG
Gln
>WENV183122804
OLNW01000046
235148
Actinomycetota
GTT
Asn
>WENV183122805
OLNW01000046
235148
Actinomycetota
GTT
Asn
>WENV183122846
OLNW01000063
235148
Actinomycetota
GTT
Asn
>WENV183122644
OLNW01000004
176456
Actinomycetota
TCT
Arg
>WENV183122687
OLNW01000010
144825
Actinomycetota
CAT
Met
>WENV183122661
OLNW01000007
338139
Actinomycetota
GTT
Asn
>WENV183122662
OLNW01000007
338139
Actinomycetota
GTT
Asn
>WENV183122688
OLNW01000010
235348
Actinomycetota
CCT
Arg
>WENV183122713
OLNW01000017
411554
Actinomycetota
CCC
Gly
>WENV183122921
OLNW01000105
113601
Actinomycetota
TAG
Leu
>WENV183122940
OLNW01000115
113601
Actinomycetota
TAG
Leu
>WENV183122761
OLNW01000034
144595
Actinomycetota
CAA
Leu
>WENV183122802
OLNW01000046
144595
Actinomycetota
CAA
Leu
>WENV183123305
OLNW01000523
145343
Actinomycetota
GGG
Pro
>WENV183123127
OLNW01000288
235149
Actinomycetota
CCT
Arg
>WENV183122612
OLNW01000001
240009
Actinomycetota
GGC
Ala
>WENV183122942
OLNW01000117
414234
Actinomycetota
CTG
Gln
>WENV183122765
OLNW01000034
163764
Actinomycetota
TGG
Pro
>WENV183122939
OLNW01000115
235121
Actinomycetota
CGT
Thr
>WENV183122932
OLNW01000112
47164
Actinomycetota
GGA
Ser
>WENV183122803
OLNW01000046
144635
Actinomycetota
TGG
Pro
>WENV183122852
OLNW01000066
61501
Actinomycetota
CAG
Leu
>WENV183122950
OLNW01000118
61501
Actinomycetota
CAG
Leu
>WENV183123467
OLNW01000917
17009
Actinomycetota
GAG
Leu
>WENV183122708
OLNW01000017
80622
Actinomycetota
CAG
Leu
>WENV183122752
OLNW01000029
80622
Actinomycetota
CAG
Leu
>WENV183122640
OLNW01000004
44851
Actinomycetota
TGA
Ser
>WENV183123571
OLNW01001251
7409
Actinomycetota
CGA
Ser
>WENV183122658
OLNW01000007
158513
Actinomycetota
TGG
Pro
>WENV183122738
OLNW01000026
412834
Actinomycetota
GCA
Cys
>WENV183122875
OLNW01000075
412834
Actinomycetota
GCA
Cys
>WENV183122711
OLNW01000017
235173
Actinomycetota
GGC
Ala
>WENV183122845
OLNW01000063
235173
Actinomycetota
GGC
Ala
>WENV183123176
OLNW01000338
237831
Actinomycetota
GCC
Gly
>WENV183123178
OLNW01000338
237831
Actinomycetota
GCC
Gly
>WENV183122833
OLNW01000058
144660
Actinomycetota
TAC
Val
>WENV183123407
OLNW01000744
278447
Actinomycetota
GTG
His
>WENV183122680
OLNW01000010
95593
Actinomycetota
>WENV183122969
OLNW01000142
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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