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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183135552
OLOE01003455
235146
Actinomycetota
CGT
Thr
>WENV183135389
OLOE01001116
166493
Actinomycetota
CTT
Lys
>WENV183135462
OLOE01001890
235153
Actinomycetota
CCT
Arg
>WENV183135875
OLOE01020756
37070
Actinomycetota
CGA
Ser
>WENV183135843
OLOE01016925
144600
Actinomycetota
TGG
Pro
>WENV183135640
OLOE01006218
235194
Actinomycetota
GTG
His
>WENV183135738
OLOE01010074
158720
Actinomycetota
ACG
Arg
>WENV183135575
OLOE01004488
245301
Actinomycetota
GCC
Gly
>WENV183135827
OLOE01015378
411601
Actinomycetota
CCC
Gly
>WENV183135455
OLOE01001853
23370
Actinomycetota
GCT
Ser
>WENV183135785
OLOE01012573
338239
Actinomycetota
TTC
Glu
>WENV183135676
OLOE01007287
235174
Actinomycetota
TGC
Ala
>WENV183135568
OLOE01004074
235101
Actinomycetota
TTT
Lys
>WENV183135683
OLOE01007425
356045
Actinomycetota
GAC
Val
>WENV183135415
OLOE01001445
153948
Actinomycetota
GGG
Pro
>WENV183135684
OLOE01007425
235199
Actinomycetota
CAC
Val
>WENV183135496
OLOE01002443
413665
Actinomycetota
TTG
Gln
>WENV183135832
OLOE01015812
254857
Actinomycetota
CCG
Arg
>WENV183135454
OLOE01001853
144700
Actinomycetota
CAT
Met
>WENV183135487
OLOE01002296
144636
Actinomycetota
GAT
Ile
>WENV183135572
OLOE01004236
243671
Actinomycetota
CTC
Glu
>WENV183135573
OLOE01004236
338148
Actinomycetota
CTG
Gln
>WENV183135846
OLOE01017155
144825
Actinomycetota
CAT
Met
>WENV183135292
OLOE01000232
338139
Actinomycetota
GTT
Asn
>WENV183135416
OLOE01001456
235348
Actinomycetota
CCT
Arg
>WENV183135735
OLOE01009859
113601
Actinomycetota
TAG
Leu
>WENV183135769
OLOE01011907
144595
Actinomycetota
CAA
Leu
>WENV183135964
OLOE01041036
145343
Actinomycetota
GGG
Pro
>WENV183135631
OLOE01005733
240009
Actinomycetota
GGC
Ala
>WENV183135353
OLOE01000801
414234
Actinomycetota
CTG
Gln
>WENV183135734
OLOE01009859
235121
Actinomycetota
CGT
Thr
>WENV183135911
OLOE01026232
417269
Actinomycetota
CCC
Gly
>WENV183135698
OLOE01008156
80622
Actinomycetota
CAG
Leu
>WENV183135941
OLOE01033650
44851
Actinomycetota
TGA
Ser
>WENV183135700
OLOE01008308
16222
Actinomycetota
GAG
Leu
>WENV183135418
OLOE01001517
158513
Actinomycetota
TGG
Pro
>WENV183135576
OLOE01004488
412834
Actinomycetota
GCA
Cys
>WENV183135550
OLOE01003414
144660
Actinomycetota
TAC
Val
>WENV183135493
OLOE01002406
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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