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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
143 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183177989
OLPG01012822
155958
Bacillota
GAT
Ile
>WENV183176939
OLPG01000049
156958
Bacillota
GAT
Ile
>WENV183177600
OLPG01002288
144612
Bacillota
TCT
Arg
>WENV183177606
OLPG01002327
144612
Bacillota
TCT
Arg
>WENV183177740
OLPG01004240
144612
Bacillota
TCT
Arg
>WENV183177446
OLPG01001390
235098
Bacillota
GAC
Val
>WENV183177476
OLPG01001542
235098
Bacillota
GAC
Val
>WENV183177615
OLPG01002457
235098
Bacillota
GAC
Val
>WENV183177928
OLPG01008996
235098
Bacillota
GAC
Val
>WENV183178016
OLPG01015003
235098
Bacillota
GAC
Val
>WENV183177709
OLPG01003645
23769
Bacillota
TAA
Leu
>WENV183177420
OLPG01001280
44854
Bacillota
TGA
Ser
>WENV183177866
OLPG01006917
44854
Bacillota
TGA
Ser
>WENV183177984
OLPG01012631
44854
Bacillota
TGA
Ser
>WENV183176843
OLPG01000010
20749
Bacillota
GCT
Ser
>WENV183177029
OLPG01000141
235154
Bacillota
GTT
Asn
>WENV183178200
OLPG01041472
144577
Bacillota
GAT
Ile
>WENV183177372
OLPG01001062
304022
Bacillota
GCC
Gly
>WENV183178150
OLPG01030806
429443
Bacillota
GCA
Cys
>WENV183177840
OLPG01006076
347827
Bacillota
TTC
Glu
>WENV183177563
OLPG01002117
59312
Bacillota
CAG
Leu
>WENV183177354
OLPG01000962
238910
Bacillota
CTT
Lys
>WENV183176916
OLPG01000034
338147
Bacillota
CTC
Glu
>WENV183176917
OLPG01000034
338147
Bacillota
CTC
Glu
>WENV183176918
OLPG01000034
338147
Bacillota
CTC
Glu
>WENV183177091
OLPG01000225
338147
Bacillota
CTC
Glu
>WENV183177169
OLPG01000413
338147
Bacillota
CTC
Glu
>WENV183177148
OLPG01000362
155273
Bacillota
CAT
Met
>WENV183178221
OLPG01045068
281701
Bacillota
TGC
Ala
>WENV183177260
OLPG01000639
361897
Bacillota
CTC
Glu
>WENV183178034
OLPG01016575
37083
Bacillota
TGA
Ser
>WENV183177707
OLPG01003645
198770
Bacillota
GTC
Asp
>WENV183177158
OLPG01000388
429429
Bacillota
CCA
Trp
>WENV183177303
OLPG01000765
429429
Bacillota
CCA
Trp
>WENV183177551
OLPG01002033
429429
Bacillota
CCA
Trp
>WENV183177832
OLPG01005961
429429
Bacillota
CCA
Trp
>WENV183177192
OLPG01000473
44859
Bacillota
AAG
Leu
>WENV183177306
OLPG01000766
44859
Bacillota
AAG
Leu
>WENV183177562
OLPG01002117
44859
Bacillota
AAG
Leu
>WENV183177439
OLPG01001356
11034
Bacillota
GGA
Ser
>WENV183177689
OLPG01003372
11034
Bacillota
GGA
Ser
>WENV183177845
OLPG01006222
11034
Bacillota
GGA
Ser
>WENV183177371
OLPG01001062
235079
Bacillota
GAA
Phe
>WENV183178199
OLPG01041472
235087
Bacillota
TGC
Ala
>WENV183177771
OLPG01004707
338149
Bacillota
CTC
Glu
>WENV183177868
OLPG01006935
338149
Bacillota
CTC
Glu
>WENV183177883
OLPG01007423
338149
Bacillota
CTC
Glu
>WENV183177926
OLPG01008874
338149
Bacillota
CTC
Glu
>WENV183177931
OLPG01009208
338149
Bacillota
CTC
Glu
>WENV183178120
OLPG01028189
144766
Bacillota
CAT
Met
>WENV183177442
OLPG01001368
245298
Bacillota
CGG
Pro
>WENV183177857
OLPG01006608
37269
Bacillota
TGA
Ser
>WENV183177738
OLPG01004218
155089
Bacillota
CAT
Met
>WENV183177808
OLPG01005457
413152
Bacillota
TCC
Gly
>WENV183177630
OLPG01002625
162445
Bacillota
CAT
Met
>WENV183177996
OLPG01013115
201704
Bacillota
GAT
Ile
>WENV183177431
OLPG01001319
152492
Bacillota
GGG
Pro
>WENV183177460
OLPG01001444
152492
Bacillota
GGG
Pro
>WENV183177650
OLPG01002821
152492
Bacillota
GGG
Pro
>WENV183177690
OLPG01003399
152492
Bacillota
GGG
Pro
>WENV183177730
OLPG01004098
152492
Bacillota
GGG
Pro
>WENV183177842
OLPG01006088
152492
Bacillota
GGG
Pro
>WENV183177851
OLPG01006468
152492
Bacillota
GGG
Pro
>WENV183177188
OLPG01000460
152492
Bacillota
GGG
Pro
>WENV183177008
OLPG01000117
235078
Bacillota
TAC
Val
>WENV183177218
OLPG01000539
100326
Bacillota
GTA
Tyr
>WENV183177009
OLPG01000117
240017
Bacillota
GCC
Gly
>WENV183177366
OLPG01001046
411547
Bacillota
CTG
Gln
>WENV183177441
OLPG01001368
411547
Bacillota
CTG
Gln
>WENV183177451
OLPG01001404
411547
Bacillota
CTG
Gln
>WENV183177779
OLPG01004893
411547
Bacillota
CTG
Gln
>WENV183177953
OLPG01010443
411547
Bacillota
CTG
Gln
>WENV183176994
OLPG01000087
147684
Bacillota
ACG
Arg
>WENV183177293
OLPG01000730
147684
Bacillota
ACG
Arg
>WENV183177296
OLPG01000749
147684
Bacillota
ACG
Arg
>WENV183177649
OLPG01002810
147684
Bacillota
ACG
Arg
>WENV183177421
OLPG01001280
4624
Bacillota
GCT
Ser
>WENV183177867
OLPG01006917
4624
Bacillota
GCT
Ser
>WENV183177985
OLPG01012631
4624
Bacillota
GCT
Ser
>WENV183176827
OLPG01000007
263765
Bacillota
TAC
Val
>WENV183177594
OLPG01002282
412387
Bacillota
GCA
Cys
>WENV183177860
OLPG01006719
412387
Bacillota
GCA
Cys
>WENV183177861
OLPG01006792
18852
Bacillota
GCT
Ser
>WENV183177770
OLPG01004636
235095
Bacillota
GGT
Thr
>WENV183177558
OLPG01002083
235095
Bacillota
GGT
Thr
>WENV183177659
OLPG01002886
235095
Bacillota
GGT
Thr
>WENV183177705
OLPG01003645
239832
Bacillota
TGT
Thr
>WENV183177946
OLPG01009864
411549
Bacillota
TTG
Gln
>WENV183177345
OLPG01000923
235142
Bacillota
CTT
Lys
>WENV183177092
OLPG01000233
235142
Bacillota
CTT
Lys
>WENV183177356
OLPG01000980
59296
Bacillota
AAG
Leu
>WENV183177244
OLPG01000608
148188
Bacillota
CCG
Arg
>WENV183177795
OLPG01005186
148188
Bacillota
CCG
Arg
>WENV183177960
OLPG01010920
148188
Bacillota
CCG
Arg
>WENV183177541
OLPG01001964
80612
Bacillota
GTA
Tyr
>WENV183177416
OLPG01001268
256380
Bacillota
>WENV183176902
OLPG01000022
235127
Bacillota
TTT
Lys
>WENV183178140
OLPG01029955
298620
Bacillota
CAT
Met
>WENV183177405
OLPG01001219
235124
Bacillota
TGG
Pro
>WENV183177419
OLPG01001275
235124
Bacillota
TGG
Pro
>WENV183177821
OLPG01005650
235124
Bacillota
TGG
Pro
>WENV183177882
OLPG01007401
235124
Bacillota
TGG
Pro
>WENV183178122
OLPG01028189
163753
Bacillota
TGG
Pro
>WENV183177180
OLPG01000434
338129
Bacillota
TGT
Thr
>WENV183177667
OLPG01003046
338129
Bacillota
TGT
Thr
>WENV183177123
OLPG01000318
157838
Bacillota
GTC
Asp
>WENV183177262
OLPG01000647
157838
Bacillota
GTC
Asp
>WENV183177143
OLPG01000362
247734
Bacillota
TGC
Ala
>WENV183177101
OLPG01000250
144621
Bacillota
GTT
Asn
>WENV183177342
OLPG01000910
144621
Bacillota
GTT
Asn
>WENV183177772
OLPG01004707
144621
Bacillota
GTT
Asn
>WENV183177869
OLPG01006935
144621
Bacillota
GTT
Asn
>WENV183177884
OLPG01007423
144621
Bacillota
GTT
Asn
>WENV183177927
OLPG01008874
144621
Bacillota
GTT
Asn
>WENV183177932
OLPG01009208
144621
Bacillota
GTT
Asn
>WENV183176910
OLPG01000031
235113
Bacillota
GAA
Phe
>WENV183177597
OLPG01002284
243098
Bacillota
GGT
Thr
>WENV183177208
OLPG01000526
58712
Bacillota
CAG
Leu
>WENV183177210
OLPG01000526
58712
Bacillota
CAG
Leu
>WENV183177540
OLPG01001964
58712
Bacillota
CAG
Leu
>WENV183177886
OLPG01007541
58712
Bacillota
CAG
Leu
>WENV183177102
OLPG01000250
245296
Bacillota
CCC
Gly
>WENV183177205
OLPG01000516
245296
Bacillota
CCC
Gly
>WENV183177515
OLPG01001800
245296
Bacillota
CCC
Gly
>WENV183177698
OLPG01003575
245296
Bacillota
CCC
Gly
>WENV183178156
OLPG01032119
272992
Bacillota
CTT
Lys
>WENV183177511
OLPG01001784
344240
Bacillota
GCC
Gly
>WENV183178185
OLPG01039650
344240
Bacillota
GCC
Gly
>WENV183178204
OLPG01042197
37221
Bacillota
TAA
Leu
>WENV183177498
OLPG01001709
144594
Bacillota
CAC
Val
>WENV183177688
OLPG01003367
144594
Bacillota
CAC
Val
>WENV183177090
OLPG01000225
95563
Bacillota
GTA
Tyr
>WENV183177428
OLPG01001301
414486
Bacillota
CCC
Gly
>WENV183177637
OLPG01002657
272488
Bacillota
GAA
Phe
>WENV183178151
OLPG01030944
272488
Bacillota
GAA
Phe
>WENV183177722
OLPG01003936
114075
Bacillota
TAG
Leu
>WENV183178205
OLPG01042197
166238
Bacillota
ACG
Arg
>WENV183177076
OLPG01000220
119513
Bacillota
CAA
Leu
>WENV183177122
OLPG01000318
263523
Bacillota
TAC
Val
>WENV183177997
OLPG01013284
273862
Bacillota
TGC
Ala
>WENV183177579
OLPG01002194
338128
Bacillota
TTC
Glu
>WENV183177729
OLPG01004057
338128
Bacillota
TTC
Glu
>WENV183177838
OLPG01006072
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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