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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183206357
OLQA01000610
235146
Actinomycetota
CGT
Thr
>WENV183206992
OLQA01005004
119475
Actinomycetota
TAA
Leu
>WENV183207180
OLQA01007950
235347
Actinomycetota
GGC
Ala
>WENV183206329
OLQA01000514
166493
Actinomycetota
CTT
Lys
>WENV183206453
OLQA01000913
235153
Actinomycetota
CCT
Arg
>WENV183206961
OLQA01004561
235153
Actinomycetota
CCT
Arg
>WENV183206513
OLQA01001196
144589
Actinomycetota
ACG
Arg
>WENV183206754
OLQA01002561
16400
Actinomycetota
GAG
Leu
>WENV183206642
OLQA01001895
37070
Actinomycetota
CGA
Ser
>WENV183206283
OLQA01000418
144600
Actinomycetota
TGG
Pro
>WENV183206368
OLQA01000636
235092
Actinomycetota
CCG
Arg
>WENV183207027
OLQA01005443
235194
Actinomycetota
GTG
His
>WENV183207757
OLQA01042862
273786
Actinomycetota
CGT
Thr
>WENV183206580
OLQA01001541
245301
Actinomycetota
GCC
Gly
>WENV183206370
OLQA01000642
411601
Actinomycetota
CCC
Gly
>WENV183206711
OLQA01002244
144826
Actinomycetota
GGG
Pro
>WENV183206297
OLQA01000444
23370
Actinomycetota
GCT
Ser
>WENV183207034
OLQA01005506
338239
Actinomycetota
TTC
Glu
>WENV183207453
OLQA01017442
338239
Actinomycetota
TTC
Glu
>WENV183206694
OLQA01002155
162208
Actinomycetota
TAC
Val
>WENV183206294
OLQA01000437
16219
Actinomycetota
GCT
Ser
>WENV183206399
OLQA01000749
235174
Actinomycetota
TGC
Ala
>WENV183206677
OLQA01002077
235101
Actinomycetota
TTT
Lys
>WENV183206742
OLQA01002466
235101
Actinomycetota
TTT
Lys
>WENV183206798
OLQA01002847
235101
Actinomycetota
TTT
Lys
>WENV183206298
OLQA01000445
121510
Actinomycetota
TAA
Leu
>WENV183206474
OLQA01001004
144625
Actinomycetota
GTC
Asp
>WENV183206425
OLQA01000845
153948
Actinomycetota
GGG
Pro
>WENV183206251
OLQA01000353
44855
Actinomycetota
TGA
Ser
>WENV183207684
OLQA01033436
37212
Actinomycetota
GAG
Leu
>WENV183206577
OLQA01001534
145345
Actinomycetota
TAC
Val
>WENV183206738
OLQA01002417
44862
Actinomycetota
CGA
Ser
>WENV183206555
OLQA01001381
413665
Actinomycetota
TTG
Gln
>WENV183207045
OLQA01005669
254857
Actinomycetota
CCG
Arg
>WENV183206308
OLQA01000467
16223
Actinomycetota
GAG
Leu
>WENV183206376
OLQA01000659
144593
Actinomycetota
TAT
Ile
>WENV183206358
OLQA01000610
113703
Actinomycetota
TAG
Leu
>WENV183206296
OLQA01000444
144700
Actinomycetota
CAT
Met
>WENV183206310
OLQA01000469
144636
Actinomycetota
GAT
Ile
>WENV183206833
OLQA01003126
158375
Actinomycetota
CAT
Met
>WENV183206875
OLQA01003514
243671
Actinomycetota
CTC
Glu
>WENV183206657
OLQA01001963
45147
Actinomycetota
CGA
Ser
>WENV183206292
OLQA01000437
98279
Actinomycetota
GTA
Tyr
>WENV183206542
OLQA01001316
338148
Actinomycetota
CTG
Gln
>WENV183206876
OLQA01003514
338148
Actinomycetota
CTG
Gln
>WENV183206620
OLQA01001739
235148
Actinomycetota
GTT
Asn
>WENV183206621
OLQA01001739
235148
Actinomycetota
GTT
Asn
>WENV183206930
OLQA01004169
235148
Actinomycetota
GTT
Asn
>WENV183206935
OLQA01004192
237792
Actinomycetota
CCT
Arg
>WENV183207089
OLQA01006418
113702
Actinomycetota
TAA
Leu
>WENV183206270
OLQA01000390
176456
Actinomycetota
TCT
Arg
>WENV183206108
OLQA01000099
144825
Actinomycetota
CAT
Met
>WENV183206109
OLQA01000099
235348
Actinomycetota
CCT
Arg
>WENV183206822
OLQA01003034
237794
Actinomycetota
CCG
Arg
>WENV183206208
OLQA01000285
411554
Actinomycetota
CCC
Gly
>WENV183207271
OLQA01010079
411554
Actinomycetota
CCC
Gly
>WENV183206218
OLQA01000305
113601
Actinomycetota
TAG
Leu
>WENV183206282
OLQA01000418
144595
Actinomycetota
CAA
Leu
>WENV183206299
OLQA01000445
144595
Actinomycetota
CAA
Leu
>WENV183207606
OLQA01025784
144595
Actinomycetota
CAA
Leu
>WENV183206225
OLQA01000317
145343
Actinomycetota
GGG
Pro
>WENV183206600
OLQA01001627
235149
Actinomycetota
CCT
Arg
>WENV183207196
OLQA01008410
414234
Actinomycetota
CTG
Gln
>WENV183207432
OLQA01015673
414234
Actinomycetota
CTG
Gln
>WENV183206217
OLQA01000305
235121
Actinomycetota
CGT
Thr
>WENV183206679
OLQA01002081
47164
Actinomycetota
GGA
Ser
>WENV183206809
OLQA01002898
47164
Actinomycetota
GGA
Ser
>WENV183206995
OLQA01005079
144635
Actinomycetota
TGG
Pro
>WENV183207289
OLQA01010583
61501
Actinomycetota
CAG
Leu
>WENV183206475
OLQA01001010
17009
Actinomycetota
GAG
Leu
>WENV183207774
OLQA01045927
44851
Actinomycetota
TGA
Ser
>WENV183206254
OLQA01000360
158513
Actinomycetota
TGG
Pro
>WENV183207313
OLQA01011282
158513
Actinomycetota
TGG
Pro
>WENV183206826
OLQA01003059
163948
Actinomycetota
CAT
Met
>WENV183206581
OLQA01001541
412834
Actinomycetota
GCA
Cys
>WENV183206556
OLQA01001381
235173
Actinomycetota
GGC
Ala
>WENV183206887
OLQA01003701
235173
Actinomycetota
GGC
Ala
>WENV183206735
OLQA01002390
243162
Actinomycetota
GTT
Asn
>WENV183206412
OLQA01000791
144660
Actinomycetota
TAC
Val
>WENV183206928
OLQA01004143
278447
Actinomycetota
GTG
His
>WENV183206223
OLQA01000315
183544
Actinomycetota
CAT
Met
>WENV183207571
OLQA01023141
267574
Actinomycetota
CAC
Val
>WENV183206295
OLQA01000444
95593
Actinomycetota
>WENV183207019
OLQA01005318
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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