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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183213370
OLQD01048251
235146
Actinomycetota
CGT
Thr
>WENV183213490
OLQD01068829
37070
Actinomycetota
CGA
Ser
>WENV183213001
OLQD01015545
245301
Actinomycetota
GCC
Gly
>WENV183213394
OLQD01051791
411601
Actinomycetota
CCC
Gly
>WENV183213537
OLQD01080008
23370
Actinomycetota
GCT
Ser
>WENV183213395
OLQD01052015
174149
Actinomycetota
GAT
Ile
>WENV183213431
OLQD01059142
235174
Actinomycetota
TGC
Ala
>WENV183213191
OLQD01027547
356045
Actinomycetota
GAC
Val
>WENV183213600
OLQD01109113
37212
Actinomycetota
GAG
Leu
>WENV183213562
OLQD01091270
254857
Actinomycetota
CCG
Arg
>WENV183213359
OLQD01046678
144593
Actinomycetota
TAT
Ile
>WENV183213000
OLQD01015544
144636
Actinomycetota
GAT
Ile
>WENV183213471
OLQD01066355
243671
Actinomycetota
CTC
Glu
>WENV183213450
OLQD01063154
98279
Actinomycetota
GTA
Tyr
>WENV183213472
OLQD01066355
338148
Actinomycetota
CTG
Gln
>WENV183212684
OLQD01006481
338139
Actinomycetota
GTT
Asn
>WENV183213568
OLQD01093932
113601
Actinomycetota
TAG
Leu
>WENV183212420
OLQD01002608
414234
Actinomycetota
CTG
Gln
>WENV183213567
OLQD01093932
235121
Actinomycetota
CGT
Thr
>WENV183213588
OLQD01104703
44851
Actinomycetota
TGA
Ser
>WENV183213184
OLQD01026984
158513
Actinomycetota
TGG
Pro
>WENV183213432
OLQD01059142
235173
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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