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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
139 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183244827
OLRE01000491
196621
Bacillota
GTC
Asp
>WENV183245190
OLRE01001778
196621
Bacillota
GTC
Asp
>WENV183245308
OLRE01002402
196621
Bacillota
GTC
Asp
>WENV183245451
OLRE01003501
196621
Bacillota
GTC
Asp
>WENV183245548
OLRE01004966
155113
Bacillota
CGG
Pro
>WENV183245394
OLRE01002925
37213
Bacillota
TGA
Ser
>WENV183245112
OLRE01001373
144612
Bacillota
TCT
Arg
>WENV183245220
OLRE01001926
144612
Bacillota
TCT
Arg
>WENV183245376
OLRE01002836
144612
Bacillota
TCT
Arg
>WENV183244513
OLRE01000088
154063
Bacillota
CGG
Pro
>WENV183244649
OLRE01000224
235134
Bacillota
GAA
Phe
>WENV183245208
OLRE01001837
235098
Bacillota
GAC
Val
>WENV183245457
OLRE01003526
235098
Bacillota
GAC
Val
>WENV183245483
OLRE01003754
235098
Bacillota
GAC
Val
>WENV183245002
OLRE01000929
338152
Bacillota
TTC
Glu
>WENV183245079
OLRE01001192
338152
Bacillota
TTC
Glu
>WENV183244684
OLRE01000270
148239
Bacillota
TCT
Arg
>WENV183245186
OLRE01001745
44854
Bacillota
TGA
Ser
>WENV183245562
OLRE01005384
44854
Bacillota
TGA
Ser
>WENV183246060
OLRE01053880
235154
Bacillota
GTT
Asn
>WENV183244825
OLRE01000491
304022
Bacillota
GCC
Gly
>WENV183244829
OLRE01000491
304022
Bacillota
GCC
Gly
>WENV183245802
OLRE01014038
274026
Bacillota
TTT
Lys
>WENV183244389
OLRE01000007
59312
Bacillota
CAG
Leu
>WENV183245015
OLRE01000966
238910
Bacillota
CTT
Lys
>WENV183245499
OLRE01004208
238910
Bacillota
CTT
Lys
>WENV183244501
OLRE01000079
338147
Bacillota
CTC
Glu
>WENV183244502
OLRE01000079
338147
Bacillota
CTC
Glu
>WENV183244503
OLRE01000079
338147
Bacillota
CTC
Glu
>WENV183244540
OLRE01000111
155273
Bacillota
CAT
Met
>WENV183245803
OLRE01014038
114359
Bacillota
TAG
Leu
>WENV183244872
OLRE01000579
340802
Bacillota
TTG
Gln
>WENV183244982
OLRE01000877
293599
Bacillota
CTT
Lys
>WENV183245292
OLRE01002292
429429
Bacillota
CCA
Trp
>WENV183245312
OLRE01002412
429429
Bacillota
CCA
Trp
>WENV183245498
OLRE01004200
429429
Bacillota
CCA
Trp
>WENV183245542
OLRE01004826
429429
Bacillota
CCA
Trp
>WENV183245237
OLRE01001996
11034
Bacillota
GGA
Ser
>WENV183245496
OLRE01004199
11034
Bacillota
GGA
Ser
>WENV183245888
OLRE01020238
11034
Bacillota
GGA
Ser
>WENV183244826
OLRE01000491
235117
Bacillota
TAC
Val
>WENV183244871
OLRE01000579
156937
Bacillota
GTG
His
>WENV183245284
OLRE01002277
274189
Bacillota
TGT
Thr
>WENV183244828
OLRE01000491
235079
Bacillota
GAA
Phe
>WENV183245836
OLRE01016226
235087
Bacillota
TGC
Ala
>WENV183245379
OLRE01002840
338149
Bacillota
CTC
Glu
>WENV183245585
OLRE01005926
338149
Bacillota
CTC
Glu
>WENV183245392
OLRE01002920
271471
Bacillota
GCC
Gly
>WENV183245099
OLRE01001309
245298
Bacillota
CGG
Pro
>WENV183245475
OLRE01003638
245298
Bacillota
CGG
Pro
>WENV183245087
OLRE01001237
37269
Bacillota
TGA
Ser
>WENV183245601
OLRE01006392
37269
Bacillota
TGA
Ser
>WENV183245001
OLRE01000929
287000
Bacillota
GTT
Asn
>WENV183245003
OLRE01000929
287000
Bacillota
GTT
Asn
>WENV183245478
OLRE01003653
169968
Bacillota
CAT
Met
>WENV183245565
OLRE01005426
413152
Bacillota
TCC
Gly
>WENV183245103
OLRE01001339
173810
Bacillota
CAT
Met
>WENV183244877
OLRE01000580
152149
Bacillota
GTG
His
>WENV183245871
OLRE01019166
201704
Bacillota
GAT
Ile
>WENV183244729
OLRE01000305
152492
Bacillota
GGG
Pro
>WENV183245108
OLRE01001359
152492
Bacillota
GGG
Pro
>WENV183245229
OLRE01001960
152492
Bacillota
GGG
Pro
>WENV183245365
OLRE01002762
152492
Bacillota
GGG
Pro
>WENV183245695
OLRE01009281
152492
Bacillota
GGG
Pro
>WENV183245746
OLRE01011228
152492
Bacillota
GGG
Pro
>WENV183245961
OLRE01030005
152492
Bacillota
GGG
Pro
>WENV183244987
OLRE01000902
100326
Bacillota
GTA
Tyr
>WENV183244685
OLRE01000270
144610
Bacillota
GTG
His
>WENV183244650
OLRE01000224
240017
Bacillota
GCC
Gly
>WENV183244839
OLRE01000517
411547
Bacillota
CTG
Gln
>WENV183245055
OLRE01001130
411547
Bacillota
CTG
Gln
>WENV183245098
OLRE01001309
411547
Bacillota
CTG
Gln
>WENV183245474
OLRE01003638
411547
Bacillota
CTG
Gln
>WENV183245543
OLRE01004871
411547
Bacillota
CTG
Gln
>WENV183244705
OLRE01000292
147684
Bacillota
ACG
Arg
>WENV183245187
OLRE01001745
4624
Bacillota
GCT
Ser
>WENV183245563
OLRE01005384
4624
Bacillota
GCT
Ser
>WENV183244647
OLRE01000224
263765
Bacillota
TAC
Val
>WENV183244818
OLRE01000460
263765
Bacillota
TAC
Val
>WENV183244835
OLRE01000498
412387
Bacillota
GCA
Cys
>WENV183245369
OLRE01002795
412387
Bacillota
GCA
Cys
>WENV183245690
OLRE01008902
339362
Bacillota
GTT
Asn
>WENV183245036
OLRE01001067
235095
Bacillota
GGT
Thr
>WENV183245191
OLRE01001778
235095
Bacillota
GGT
Thr
>WENV183245192
OLRE01001778
235095
Bacillota
GGT
Thr
>WENV183245309
OLRE01002402
235095
Bacillota
GGT
Thr
>WENV183245452
OLRE01003501
235095
Bacillota
GGT
Thr
>WENV183245453
OLRE01003501
235095
Bacillota
GGT
Thr
>WENV183244712
OLRE01000298
344183
Bacillota
CTG
Gln
>WENV183244612
OLRE01000191
239832
Bacillota
TGT
Thr
>WENV183244870
OLRE01000579
152151
Bacillota
TCT
Arg
>WENV183245750
OLRE01011408
154748
Bacillota
GTC
Asp
>WENV183245097
OLRE01001309
411549
Bacillota
TTG
Gln
>WENV183245403
OLRE01002991
411549
Bacillota
TTG
Gln
>WENV183245552
OLRE01005025
59296
Bacillota
AAG
Leu
>WENV183245038
OLRE01001072
238413
Bacillota
GGT
Thr
>WENV183245039
OLRE01001080
148188
Bacillota
CCG
Arg
>WENV183245462
OLRE01003567
148188
Bacillota
CCG
Arg
>WENV183245818
OLRE01014535
148188
Bacillota
CCG
Arg
>WENV183245879
OLRE01019564
148188
Bacillota
CCG
Arg
>WENV183245295
OLRE01002302
298639
Bacillota
GTT
Asn
>WENV183244481
OLRE01000060
256380
Bacillota
>WENV183245784
OLRE01013205
298620
Bacillota
CAT
Met
>WENV183245700
OLRE01009568
241432
Bacillota
TGT
Thr
>WENV183246062
OLRE01053880
241432
Bacillota
TGT
Thr
>WENV183245182
OLRE01001720
235124
Bacillota
TGG
Pro
>WENV183245776
OLRE01012724
235124
Bacillota
TGG
Pro
>WENV183245900
OLRE01021287
235124
Bacillota
TGG
Pro
>WENV183246041
OLRE01047240
235506
Bacillota
TGC
Ala
>WENV183244919
OLRE01000692
338129
Bacillota
TGT
Thr
>WENV183245025
OLRE01001019
144583
Bacillota
ACG
Arg
>WENV183244535
OLRE01000111
247734
Bacillota
TGC
Ala
>WENV183245885
OLRE01019979
419877
Bacillota
TCC
Gly
>WENV183245189
OLRE01001778
235171
Bacillota
CCA
Trp
>WENV183245307
OLRE01002402
235171
Bacillota
CCA
Trp
>WENV183245450
OLRE01003501
235171
Bacillota
CCA
Trp
>WENV183244573
OLRE01000141
238974
Bacillota
GAA
Phe
>WENV183245380
OLRE01002840
144621
Bacillota
GTT
Asn
>WENV183245556
OLRE01005193
144621
Bacillota
GTT
Asn
>WENV183245586
OLRE01005926
144621
Bacillota
GTT
Asn
>WENV183245721
OLRE01010350
144621
Bacillota
GTT
Asn
>WENV183245222
OLRE01001926
58712
Bacillota
CAG
Leu
>WENV183245415
OLRE01003107
58712
Bacillota
CAG
Leu
>WENV183245731
OLRE01010854
58712
Bacillota
CAG
Leu
>WENV183245102
OLRE01001319
245296
Bacillota
CCC
Gly
>WENV183245300
OLRE01002308
245296
Bacillota
CCC
Gly
>WENV183245325
OLRE01002462
272992
Bacillota
CTT
Lys
>WENV183246039
OLRE01046537
198135
Bacillota
GAT
Ile
>WENV183244842
OLRE01000524
144594
Bacillota
CAC
Val
>WENV183245153
OLRE01001538
144594
Bacillota
CAC
Val
>WENV183245252
OLRE01002116
144594
Bacillota
CAC
Val
>WENV183246099
OLRE01063430
338127
Bacillota
TTG
Gln
>WENV183245168
OLRE01001587
272488
Bacillota
GAA
Phe
>WENV183245417
OLRE01003113
272488
Bacillota
GAA
Phe
>WENV183244596
OLRE01000167
119513
Bacillota
CAA
Leu
>WENV183245761
OLRE01011944
273862
Bacillota
TGC
Ala
>WENV183244771
OLRE01000354
338128
Bacillota
TTC
Glu
>WENV183244963
OLRE01000807
338128
Bacillota
TTC
Glu
>WENV183245228
OLRE01001951
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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