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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183312403
OLVP01000021
235146
Actinomycetota
CGT
Thr
>WENV183312666
OLVP01000420
119475
Actinomycetota
TAA
Leu
>WENV183312606
OLVP01000279
235347
Actinomycetota
GGC
Ala
>WENV183312466
OLVP01000066
144589
Actinomycetota
ACG
Arg
>WENV183312626
OLVP01000322
37070
Actinomycetota
CGA
Ser
>WENV183312386
OLVP01000010
201717
Actinomycetota
CTT
Lys
>WENV183312607
OLVP01000279
144600
Actinomycetota
TGG
Pro
>WENV183312592
OLVP01000244
235092
Actinomycetota
CCG
Arg
>WENV183312663
OLVP01000406
235194
Actinomycetota
GTG
His
>WENV183312401
OLVP01000021
273786
Actinomycetota
CGT
Thr
>WENV183312778
OLVP01000808
158720
Actinomycetota
ACG
Arg
>WENV183312393
OLVP01000014
411601
Actinomycetota
CCC
Gly
>WENV183312389
OLVP01000010
144826
Actinomycetota
GGG
Pro
>WENV183312788
OLVP01000898
23370
Actinomycetota
GCT
Ser
>WENV183312542
OLVP01000147
174149
Actinomycetota
GAT
Ile
>WENV183312490
OLVP01000094
338239
Actinomycetota
TTC
Glu
>WENV183312543
OLVP01000147
235174
Actinomycetota
TGC
Ala
>WENV183312477
OLVP01000079
235101
Actinomycetota
TTT
Lys
>WENV183312454
OLVP01000054
121510
Actinomycetota
TAA
Leu
>WENV183312489
OLVP01000094
44855
Actinomycetota
TGA
Ser
>WENV183312453
OLVP01000052
145345
Actinomycetota
TAC
Val
>WENV183312404
OLVP01000021
235199
Actinomycetota
CAC
Val
>WENV183312488
OLVP01000094
44862
Actinomycetota
CGA
Ser
>WENV183312605
OLVP01000279
413665
Actinomycetota
TTG
Gln
>WENV183312387
OLVP01000010
254857
Actinomycetota
CCG
Arg
>WENV183312497
OLVP01000102
16223
Actinomycetota
GAG
Leu
>WENV183312484
OLVP01000088
144593
Actinomycetota
TAT
Ile
>WENV183312787
OLVP01000898
144700
Actinomycetota
CAT
Met
>WENV183312394
OLVP01000014
295695
Actinomycetota
CTC
Glu
>WENV183312462
OLVP01000065
295695
Actinomycetota
CTC
Glu
>WENV183312836
OLVP01001123
98279
Actinomycetota
GTA
Tyr
>WENV183312395
OLVP01000014
338148
Actinomycetota
CTG
Gln
>WENV183312463
OLVP01000065
338148
Actinomycetota
CTG
Gln
>WENV183312366
OLVP01000008
235148
Actinomycetota
GTT
Asn
>WENV183312422
OLVP01000034
235148
Actinomycetota
GTT
Asn
>WENV183312613
OLVP01000299
235148
Actinomycetota
GTT
Asn
>WENV183312619
OLVP01000308
176456
Actinomycetota
TCT
Arg
>WENV183312418
OLVP01000031
144825
Actinomycetota
CAT
Met
>WENV183312419
OLVP01000031
235348
Actinomycetota
CCT
Arg
>WENV183312501
OLVP01000106
411554
Actinomycetota
CCC
Gly
>WENV183312402
OLVP01000021
113601
Actinomycetota
TAG
Leu
>WENV183312465
OLVP01000065
113601
Actinomycetota
TAG
Leu
>WENV183312719
OLVP01000597
144595
Actinomycetota
CAA
Leu
>WENV183312843
OLVP01001173
144595
Actinomycetota
CAA
Leu
>WENV183312371
OLVP01000008
145343
Actinomycetota
GGG
Pro
>WENV183312553
OLVP01000157
235149
Actinomycetota
CCT
Arg
>WENV183312464
OLVP01000065
235121
Actinomycetota
CGT
Thr
>WENV183312391
OLVP01000010
47164
Actinomycetota
GGA
Ser
>WENV183312844
OLVP01001173
144635
Actinomycetota
TGG
Pro
>WENV183313348
OLVP01026980
429234
Actinomycetota
CTG
Gln
>WENV183312392
OLVP01000014
80622
Actinomycetota
CAG
Leu
>WENV183312502
OLVP01000106
80622
Actinomycetota
CAG
Leu
>WENV183312627
OLVP01000322
44851
Actinomycetota
TGA
Ser
>WENV183312372
OLVP01000008
16222
Actinomycetota
GAG
Leu
>WENV183312602
OLVP01000275
235173
Actinomycetota
GGC
Ala
>WENV183312421
OLVP01000034
243162
Actinomycetota
GTT
Asn
>WENV183312618
OLVP01000307
144660
Actinomycetota
TAC
Val
>WENV183312368
OLVP01000008
278447
Actinomycetota
GTG
His
>WENV183312878
OLVP01001327
95593
Actinomycetota
>WENV183312565
OLVP01000185
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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