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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183353489
OLXB01000158
155958
Bacillota
GAT
Ile
>WENV183353390
OLXB01000054
158247
Bacillota
>WENV183354298
OLXB01037921
156189
Bacillota
GAT
Ile
>WENV183354307
OLXB01039884
429443
Bacillota
GCA
Cys
>WENV183354036
OLXB01007767
238910
Bacillota
CTT
Lys
>WENV183353909
OLXB01003385
281701
Bacillota
TGC
Ala
>WENV183354310
OLXB01041955
235117
Bacillota
TAC
Val
>WENV183353364
OLXB01000040
287000
Bacillota
GTT
Asn
>WENV183353448
OLXB01000114
287000
Bacillota
GTT
Asn
>WENV183353449
OLXB01000114
287000
Bacillota
GTT
Asn
>WENV183354113
OLXB01012223
169968
Bacillota
CAT
Met
>WENV183353869
OLXB01002684
173810
Bacillota
CAT
Met
>WENV183353635
OLXB01000464
152149
Bacillota
GTG
His
>WENV183354314
OLXB01043709
147684
Bacillota
ACG
Arg
>WENV183353519
OLXB01000205
263765
Bacillota
TAC
Val
>WENV183353958
OLXB01004801
154711
Bacillota
TGG
Pro
>WENV183353531
OLXB01000213
163943
Bacillota
GTC
Asp
>WENV183353354
OLXB01000034
298620
Bacillota
CAT
Met
>WENV183353405
OLXB01000065
157838
Bacillota
GTC
Asp
>WENV183353921
OLXB01003709
320668
Bacillota
CTT
Lys
>WENV183354120
OLXB01012509
198135
Bacillota
GAT
Ile
>WENV183353275
OLXB01000003
338127
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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