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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183357668
OLXG01000154
119475
Actinomycetota
TAA
Leu
>WENV183357709
OLXG01000413
144589
Actinomycetota
ACG
Arg
>WENV183357610
OLXG01000028
37070
Actinomycetota
CGA
Ser
>WENV183357654
OLXG01000110
235092
Actinomycetota
CCG
Arg
>WENV183357679
OLXG01000181
162208
Actinomycetota
TAC
Val
>WENV183357703
OLXG01000296
16219
Actinomycetota
GCT
Ser
>WENV183357626
OLXG01000065
235174
Actinomycetota
TGC
Ala
>WENV183357749
OLXG01000701
235101
Actinomycetota
TTT
Lys
>WENV183358330
OLXG01039300
121510
Actinomycetota
TAA
Leu
>WENV183358441
OLXG01076119
144625
Actinomycetota
GTC
Asp
>WENV183358074
OLXG01009897
413665
Actinomycetota
TTG
Gln
>WENV183357638
OLXG01000078
144593
Actinomycetota
TAT
Ile
>WENV183358338
OLXG01040809
144636
Actinomycetota
GAT
Ile
>WENV183357597
OLXG01000022
98279
Actinomycetota
GTA
Tyr
>WENV183357619
OLXG01000053
338148
Actinomycetota
CTG
Gln
>WENV183357757
OLXG01000767
235148
Actinomycetota
GTT
Asn
>WENV183358030
OLXG01008038
235148
Actinomycetota
GTT
Asn
>WENV183357632
OLXG01000073
176456
Actinomycetota
TCT
Arg
>WENV183358358
OLXG01045911
144825
Actinomycetota
CAT
Met
>WENV183357639
OLXG01000080
411554
Actinomycetota
CCC
Gly
>WENV183357652
OLXG01000107
113601
Actinomycetota
TAG
Leu
>WENV183357772
OLXG01000899
144595
Actinomycetota
CAA
Leu
>WENV183357815
OLXG01001330
145343
Actinomycetota
GGG
Pro
>WENV183357723
OLXG01000507
235149
Actinomycetota
CCT
Arg
>WENV183357651
OLXG01000107
235121
Actinomycetota
CGT
Thr
>WENV183357773
OLXG01000899
144635
Actinomycetota
TGG
Pro
>WENV183357640
OLXG01000080
80622
Actinomycetota
CAG
Leu
>WENV183357608
OLXG01000028
44851
Actinomycetota
TGA
Ser
>WENV183358455
OLXG01080440
7409
Actinomycetota
CGA
Ser
>WENV183357627
OLXG01000065
235173
Actinomycetota
GGC
Ala
>WENV183357696
OLXG01000267
235173
Actinomycetota
GGC
Ala
>WENV183357776
OLXG01000965
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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