This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
102 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183359546
OLXI01000054
196621
Bacillota
GTC
Asp
>WENV183359992
OLXI01002681
196621
Bacillota
GTC
Asp
>WENV183360679
OLXI01070297
154063
Bacillota
CGG
Pro
>WENV183359633
OLXI01000185
235098
Bacillota
GAC
Val
>WENV183359672
OLXI01000255
235098
Bacillota
GAC
Val
>WENV183359776
OLXI01000616
235098
Bacillota
GAC
Val
>WENV183359548
OLXI01000054
44854
Bacillota
TGA
Ser
>WENV183359654
OLXI01000220
44854
Bacillota
TGA
Ser
>WENV183360374
OLXI01017164
148348
Bacillota
GTC
Asp
>WENV183359560
OLXI01000067
37071
Bacillota
TGA
Ser
>WENV183359569
OLXI01000072
59312
Bacillota
CAG
Leu
>WENV183360552
OLXI01035452
193585
Bacillota
CGG
Pro
>WENV183360589
OLXI01041357
239080
Bacillota
CTG
Gln
>WENV183359616
OLXI01000138
338147
Bacillota
CTC
Glu
>WENV183359620
OLXI01000144
338147
Bacillota
CTC
Glu
>WENV183360394
OLXI01018084
155273
Bacillota
CAT
Met
>WENV183360575
OLXI01038364
429429
Bacillota
CCA
Trp
>WENV183359729
OLXI01000446
44859
Bacillota
AAG
Leu
>WENV183359582
OLXI01000078
11034
Bacillota
GGA
Ser
>WENV183359720
OLXI01000395
11034
Bacillota
GGA
Ser
>WENV183360553
OLXI01035452
10943
Bacillota
GGA
Ser
>WENV183359959
OLXI01002105
156937
Bacillota
GTG
His
>WENV183359567
OLXI01000071
274189
Bacillota
TGT
Thr
>WENV183359596
OLXI01000102
274189
Bacillota
TGT
Thr
>WENV183359824
OLXI01000849
274189
Bacillota
TGT
Thr
>WENV183360378
OLXI01017164
37437
Bacillota
TAA
Leu
>WENV183359732
OLXI01000464
295714
Bacillota
GCC
Gly
>WENV183360188
OLXI01007580
340265
Bacillota
GCC
Gly
>WENV183360541
OLXI01033478
173314
Bacillota
GAT
Ile
>WENV183359784
OLXI01000644
338149
Bacillota
CTC
Glu
>WENV183359819
OLXI01000823
245298
Bacillota
CGG
Pro
>WENV183359855
OLXI01001118
245298
Bacillota
CGG
Pro
>WENV183359940
OLXI01001757
37269
Bacillota
TGA
Ser
>WENV183360510
OLXI01029416
287000
Bacillota
GTT
Asn
>WENV183360145
OLXI01006236
169968
Bacillota
CAT
Met
>WENV183360481
OLXI01026529
341796
Bacillota
CCG
Arg
>WENV183360375
OLXI01017164
286137
Bacillota
GAA
Phe
>WENV183359579
OLXI01000076
152149
Bacillota
GTG
His
>WENV183360407
OLXI01019653
81373
Bacillota
GTA
Tyr
>WENV183359609
OLXI01000129
235078
Bacillota
TAC
Val
>WENV183360215
OLXI01008694
100326
Bacillota
GTA
Tyr
>WENV183359612
OLXI01000129
240017
Bacillota
GCC
Gly
>WENV183359722
OLXI01000413
411547
Bacillota
CTG
Gln
>WENV183359818
OLXI01000823
411547
Bacillota
CTG
Gln
>WENV183359854
OLXI01001118
411547
Bacillota
CTG
Gln
>WENV183359549
OLXI01000054
4624
Bacillota
GCT
Ser
>WENV183359655
OLXI01000220
4624
Bacillota
GCT
Ser
>WENV183360176
OLXI01007309
412387
Bacillota
GCA
Cys
>WENV183359782
OLXI01000638
248683
Bacillota
TTT
Lys
>WENV183359544
OLXI01000054
235095
Bacillota
GGT
Thr
>WENV183359547
OLXI01000054
235095
Bacillota
GGT
Thr
>WENV183359827
OLXI01000857
235095
Bacillota
GGT
Thr
>WENV183359993
OLXI01002681
235095
Bacillota
GGT
Thr
>WENV183359890
OLXI01001299
241471
Bacillota
TGC
Ala
>WENV183360391
OLXI01017982
419639
Bacillota
GCA
Cys
>WENV183360405
OLXI01019167
96694
Bacillota
TAG
Leu
>WENV183360315
OLXI01013089
239079
Bacillota
TAC
Val
>WENV183359858
OLXI01001136
411549
Bacillota
TTG
Gln
>WENV183359682
OLXI01000298
235142
Bacillota
CTT
Lys
>WENV183360699
OLXI01076294
37588
Bacillota
TGA
Ser
>WENV183360588
OLXI01041132
154711
Bacillota
TGG
Pro
>WENV183360054
OLXI01003977
148188
Bacillota
CCG
Arg
>WENV183359581
OLXI01000078
80612
Bacillota
GTA
Tyr
>WENV183359788
OLXI01000652
256380
Bacillota
>WENV183360380
OLXI01017164
84171
Bacillota
GAG
Leu
>WENV183360312
OLXI01012975
163943
Bacillota
GTC
Asp
>WENV183359631
OLXI01000183
235124
Bacillota
TGG
Pro
>WENV183360514
OLXI01030333
342936
Bacillota
CCT
Arg
>WENV183359948
OLXI01001940
338129
Bacillota
TGT
Thr
>WENV183359651
OLXI01000213
144583
Bacillota
ACG
Arg
>WENV183360204
OLXI01008252
247734
Bacillota
TGC
Ala
>WENV183360406
OLXI01019653
127572
Bacillota
ACG
Arg
>WENV183359545
OLXI01000054
235171
Bacillota
CCA
Trp
>WENV183360704
OLXI01077260
106823
Bacillota
TAG
Leu
>WENV183360010
OLXI01002911
238974
Bacillota
GAA
Phe
>WENV183360482
OLXI01026739
238974
Bacillota
GAA
Phe
>WENV183359598
OLXI01000103
144621
Bacillota
GTT
Asn
>WENV183359767
OLXI01000590
144621
Bacillota
GTT
Asn
>WENV183359785
OLXI01000644
144621
Bacillota
GTT
Asn
>WENV183360409
OLXI01019838
235113
Bacillota
GAA
Phe
>WENV183360371
OLXI01016996
353527
Bacillota
TTC
Glu
>WENV183359870
OLXI01001195
243098
Bacillota
GGT
Thr
>WENV183359522
OLXI01000041
245296
Bacillota
CCC
Gly
>WENV183359866
OLXI01001192
245296
Bacillota
CCC
Gly
>WENV183360582
OLXI01040297
272992
Bacillota
CTT
Lys
>WENV183359752
OLXI01000539
344240
Bacillota
GCC
Gly
>WENV183360187
OLXI01007580
152497
Bacillota
GTC
Asp
>WENV183359843
OLXI01001067
196632
Bacillota
GTC
Asp
>WENV183359479
OLXI01000018
248965
Bacillota
GCC
Gly
>WENV183360540
OLXI01033478
299139
Bacillota
TGC
Ala
>WENV183359919
OLXI01001593
343021
Bacillota
CAT
Met
>WENV183359881
OLXI01001275
144594
Bacillota
CAC
Val
>WENV183359734
OLXI01000471
95563
Bacillota
GTA
Tyr
>WENV183360281
OLXI01011443
152018
Bacillota
CCT
Arg
>WENV183360133
OLXI01005910
272488
Bacillota
GAA
Phe
>WENV183359699
OLXI01000343
272488
Bacillota
GAA
Phe
>WENV183359829
OLXI01000934
238857
Bacillota
CCA
Trp
>WENV183360012
OLXI01002959
413179
Bacillota
CCC
Gly
>WENV183359684
OLXI01000304
338128
Bacillota
TTC
Glu
>WENV183359687
OLXI01000318
338128
Bacillota
TTC
Glu
>WENV183359815
OLXI01000802
338128
Bacillota
TTC
Glu
>WENV183359844
OLXI01001067
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK