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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183368601
OLXR01024915
144612
Bacillota
TCT
Arg
>WENV183368234
OLXR01001510
154063
Bacillota
CGG
Pro
>WENV183368505
OLXR01011948
235098
Bacillota
GAC
Val
>WENV183368092
OLXR01000323
148239
Bacillota
TCT
Arg
>WENV183368330
OLXR01003331
44854
Bacillota
TGA
Ser
>WENV183368689
OLXR01048478
235154
Bacillota
GTT
Asn
>WENV183368579
OLXR01020119
338147
Bacillota
CTC
Glu
>WENV183368519
OLXR01013175
235150
Bacillota
TGC
Ala
>WENV183368136
OLXR01000577
281701
Bacillota
TGC
Ala
>WENV183368472
OLXR01009903
235114
Bacillota
TTT
Lys
>WENV183368508
OLXR01012234
11034
Bacillota
GGA
Ser
>WENV183368683
OLXR01045068
247057
Bacillota
TGC
Ala
>WENV183368249
OLXR01001785
274189
Bacillota
TGT
Thr
>WENV183368352
OLXR01004233
274189
Bacillota
TGT
Thr
>WENV183367880
OLXR01000003
235079
Bacillota
GAA
Phe
>WENV183368596
OLXR01023299
173314
Bacillota
GAT
Ile
>WENV183368546
OLXR01017269
338149
Bacillota
CTC
Glu
>WENV183368565
OLXR01019009
245298
Bacillota
CGG
Pro
>WENV183368067
OLXR01000204
37269
Bacillota
TGA
Ser
>WENV183367878
OLXR01000003
235078
Bacillota
TAC
Val
>WENV183368659
OLXR01035029
240017
Bacillota
GCC
Gly
>WENV183368564
OLXR01019009
411547
Bacillota
CTG
Gln
>WENV183368331
OLXR01003331
4624
Bacillota
GCT
Ser
>WENV183368444
OLXR01008235
263765
Bacillota
TAC
Val
>WENV183368676
OLXR01040471
411549
Bacillota
TTG
Gln
>WENV183368576
OLXR01019955
148188
Bacillota
CCG
Arg
>WENV183368575
OLXR01019889
235124
Bacillota
TGG
Pro
>WENV183368527
OLXR01014859
338129
Bacillota
TGT
Thr
>WENV183368440
OLXR01007995
235113
Bacillota
GAA
Phe
>WENV183368603
OLXR01024915
58712
Bacillota
CAG
Leu
>WENV183368547
OLXR01017269
272992
Bacillota
CTT
Lys
>WENV183368499
OLXR01011455
144594
Bacillota
CAC
Val
>WENV183368695
OLXR01050555
420471
Bacillota
TCC
Gly
>WENV183367859
OLXR01000001
338127
Bacillota
TTG
Gln
>WENV183367968
OLXR01000074
272488
Bacillota
GAA
Phe
>WENV183368486
OLXR01010216
238945
Bacillota
GCC
Gly
>WENV183368449
OLXR01008570
273862
Bacillota
TGC
Ala
>WENV183368360
OLXR01004453
338128
Bacillota
TTC
Glu
>WENV183368685
OLXR01047692
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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