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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183371802
OLXW01000008
119475
Actinomycetota
TAA
Leu
>WENV183371801
OLXW01000008
144589
Actinomycetota
ACG
Arg
>WENV183371764
OLXW01000001
37070
Actinomycetota
CGA
Ser
>WENV183371917
OLXW01000135
235092
Actinomycetota
CCG
Arg
>WENV183371765
OLXW01000001
16219
Actinomycetota
GCT
Ser
>WENV183371845
OLXW01000044
235174
Actinomycetota
TGC
Ala
>WENV183371766
OLXW01000001
235101
Actinomycetota
TTT
Lys
>WENV183371825
OLXW01000031
144625
Actinomycetota
GTC
Asp
>WENV183371824
OLXW01000029
198659
Actinomycetota
TAC
Val
>WENV183371797
OLXW01000005
16223
Actinomycetota
GAG
Leu
>WENV183371826
OLXW01000031
144593
Actinomycetota
TAT
Ile
>WENV183371773
OLXW01000001
98279
Actinomycetota
GTA
Tyr
>WENV183371768
OLXW01000001
338148
Actinomycetota
CTG
Gln
>WENV183371791
OLXW01000005
235148
Actinomycetota
GTT
Asn
>WENV183371892
OLXW01000093
235148
Actinomycetota
GTT
Asn
>WENV183371980
OLXW01000247
176456
Actinomycetota
TCT
Arg
>WENV183371971
OLXW01000220
411554
Actinomycetota
CCC
Gly
>WENV183371770
OLXW01000001
113601
Actinomycetota
TAG
Leu
>WENV183371789
OLXW01000005
144595
Actinomycetota
CAA
Leu
>WENV183371796
OLXW01000005
145343
Actinomycetota
GGG
Pro
>WENV183371900
OLXW01000106
235149
Actinomycetota
CCT
Arg
>WENV183371769
OLXW01000001
235121
Actinomycetota
CGT
Thr
>WENV183371790
OLXW01000005
144635
Actinomycetota
TGG
Pro
>WENV183372266
OLXW01003261
61501
Actinomycetota
CAG
Leu
>WENV183372553
OLXW01029590
240124
Actinomycetota
CGT
Thr
>WENV183372105
OLXW01000844
429234
Actinomycetota
CTG
Gln
>WENV183372559
OLXW01031521
429234
Actinomycetota
CTG
Gln
>WENV183372554
OLXW01029921
236216
Actinomycetota
GGC
Ala
>WENV183371843
OLXW01000044
80622
Actinomycetota
CAG
Leu
>WENV183371775
OLXW01000001
44851
Actinomycetota
TGA
Ser
>WENV183371846
OLXW01000044
235173
Actinomycetota
GGC
Ala
>WENV183371891
OLXW01000093
235173
Actinomycetota
GGC
Ala
>WENV183371793
OLXW01000005
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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