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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183373574
OLXY01001010
158247
Bacillota
>WENV183374065
OLXY01026581
238910
Bacillota
CTT
Lys
>WENV183373835
OLXY01005386
235150
Bacillota
TGC
Ala
>WENV183373790
OLXY01003726
340802
Bacillota
TTG
Gln
>WENV183373620
OLXY01001477
281701
Bacillota
TGC
Ala
>WENV183373130
OLXY01000009
274189
Bacillota
TGT
Thr
>WENV183373325
OLXY01000160
235079
Bacillota
GAA
Phe
>WENV183373914
OLXY01008536
271471
Bacillota
GCC
Gly
>WENV183373823
OLXY01005020
37269
Bacillota
TGA
Ser
>WENV183373226
OLXY01000057
287000
Bacillota
GTT
Asn
>WENV183373227
OLXY01000057
287000
Bacillota
GTT
Asn
>WENV183373296
OLXY01000119
287000
Bacillota
GTT
Asn
>WENV183373743
OLXY01002932
173810
Bacillota
CAT
Met
>WENV183373477
OLXY01000464
152149
Bacillota
GTG
His
>WENV183373323
OLXY01000160
235078
Bacillota
TAC
Val
>WENV183373295
OLXY01000118
263765
Bacillota
TAC
Val
>WENV183373421
OLXY01000307
344183
Bacillota
CTG
Gln
>WENV183374078
OLXY01029059
154711
Bacillota
TGG
Pro
>WENV183373330
OLXY01000163
338410
Bacillota
TTC
Glu
>WENV183373335
OLXY01000170
163943
Bacillota
GTC
Asp
>WENV183373578
OLXY01001100
163943
Bacillota
GTC
Asp
>WENV183373311
OLXY01000141
157838
Bacillota
GTC
Asp
>WENV183373224
OLXY01000054
338127
Bacillota
TTG
Gln
>WENV183373931
OLXY01010147
272488
Bacillota
GAA
Phe
>WENV183373398
OLXY01000263
338128
Bacillota
TTC
Glu
>WENV183373893
OLXY01007340
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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