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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183410018
OMAG01037452
235146
Actinomycetota
CGT
Thr
>WENV183409272
OMAG01000022
119475
Actinomycetota
TAA
Leu
>WENV183409488
OMAG01000699
235153
Actinomycetota
CCT
Arg
>WENV183409314
OMAG01000064
144589
Actinomycetota
ACG
Arg
>WENV183409322
OMAG01000075
37070
Actinomycetota
CGA
Ser
>WENV183409236
OMAG01000004
235092
Actinomycetota
CCG
Arg
>WENV183409705
OMAG01004942
245301
Actinomycetota
GCC
Gly
>WENV183409301
OMAG01000047
16219
Actinomycetota
GCT
Ser
>WENV183409251
OMAG01000008
235174
Actinomycetota
TGC
Ala
>WENV183409275
OMAG01000026
235101
Actinomycetota
TTT
Lys
>WENV183410042
OMAG01041369
153948
Actinomycetota
GGG
Pro
>WENV183410107
OMAG01061601
235199
Actinomycetota
CAC
Val
>WENV183409930
OMAG01019783
44862
Actinomycetota
CGA
Ser
>WENV183409225
OMAG01000001
198659
Actinomycetota
TAC
Val
>WENV183410061
OMAG01046604
413665
Actinomycetota
TTG
Gln
>WENV183409305
OMAG01000052
16223
Actinomycetota
GAG
Leu
>WENV183409299
OMAG01000044
144593
Actinomycetota
TAT
Ile
>WENV183409302
OMAG01000047
98279
Actinomycetota
GTA
Tyr
>WENV183409271
OMAG01000020
338148
Actinomycetota
CTG
Gln
>WENV183409354
OMAG01000128
235148
Actinomycetota
GTT
Asn
>WENV183409360
OMAG01000139
176456
Actinomycetota
TCT
Arg
>WENV183410084
OMAG01057983
144825
Actinomycetota
CAT
Met
>WENV183409588
OMAG01002019
338139
Actinomycetota
GTT
Asn
>WENV183409939
OMAG01021064
37521
Actinomycetota
GCT
Ser
>WENV183409248
OMAG01000008
411554
Actinomycetota
CCC
Gly
>WENV183409324
OMAG01000077
113601
Actinomycetota
TAG
Leu
>WENV183409572
OMAG01001693
144595
Actinomycetota
CAA
Leu
>WENV183409477
OMAG01000605
145343
Actinomycetota
GGG
Pro
>WENV183409377
OMAG01000171
235149
Actinomycetota
CCT
Arg
>WENV183409652
OMAG01003454
414234
Actinomycetota
CTG
Gln
>WENV183409323
OMAG01000077
235121
Actinomycetota
CGT
Thr
>WENV183409306
OMAG01000052
144635
Actinomycetota
TGG
Pro
>WENV183409249
OMAG01000008
80622
Actinomycetota
CAG
Leu
>WENV183409320
OMAG01000075
44851
Actinomycetota
TGA
Ser
>WENV183409732
OMAG01006057
158513
Actinomycetota
TGG
Pro
>WENV183409252
OMAG01000008
235173
Actinomycetota
GGC
Ala
>WENV183409353
OMAG01000128
235173
Actinomycetota
GGC
Ala
>WENV183410106
OMAG01061571
243162
Actinomycetota
GTT
Asn
>WENV183409300
OMAG01000046
278447
Actinomycetota
GTG
His
>WENV183409940
OMAG01021064
411599
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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