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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183565344
OOBZ01005453
196621
Bacillota
GTC
Asp
>WENV183565422
OOBZ01007668
196621
Bacillota
GTC
Asp
>WENV183565819
OOBZ01032348
155958
Bacillota
GAT
Ile
>WENV183565195
OOBZ01003000
309417
Bacillota
GGC
Ala
>WENV183565263
OOBZ01004101
309417
Bacillota
GGC
Ala
>WENV183565352
OOBZ01005622
309417
Bacillota
GGC
Ala
>WENV183565302
OOBZ01004996
144612
Bacillota
TCT
Arg
>WENV183564886
OOBZ01000683
154063
Bacillota
CGG
Pro
>WENV183564967
OOBZ01001109
267649
Bacillota
TAC
Val
>WENV183565143
OOBZ01002353
235098
Bacillota
GAC
Val
>WENV183565271
OOBZ01004288
235098
Bacillota
GAC
Val
>WENV183565676
OOBZ01017752
235098
Bacillota
GAC
Val
>WENV183565746
OOBZ01024291
235098
Bacillota
GAC
Val
>WENV183564800
OOBZ01000364
44854
Bacillota
TGA
Ser
>WENV183566034
OOBZ01093880
235154
Bacillota
GTT
Asn
>WENV183565890
OOBZ01043127
429443
Bacillota
GCA
Cys
>WENV183564719
OOBZ01000187
307003
Bacillota
TGC
Ala
>WENV183565855
OOBZ01036643
238910
Bacillota
CTT
Lys
>WENV183565571
OOBZ01012102
338147
Bacillota
CTC
Glu
>WENV183565969
OOBZ01062152
235150
Bacillota
TGC
Ala
>WENV183565996
OOBZ01075307
235137
Bacillota
TGC
Ala
>WENV183565153
OOBZ01002437
293599
Bacillota
CTT
Lys
>WENV183565508
OOBZ01010469
144668
Bacillota
GTC
Asp
>WENV183565888
OOBZ01042304
429429
Bacillota
CCA
Trp
>WENV183566028
OOBZ01088596
379268
Bacillota
TTC
Glu
>WENV183565152
OOBZ01002427
313454
Bacillota
GAA
Phe
>WENV183564888
OOBZ01000689
11034
Bacillota
GGA
Ser
>WENV183565939
OOBZ01054915
11034
Bacillota
GGA
Ser
>WENV183564712
OOBZ01000182
235079
Bacillota
GAA
Phe
>WENV183566009
OOBZ01080166
144763
Bacillota
TGG
Pro
>WENV183565930
OOBZ01051904
173314
Bacillota
GAT
Ile
>WENV183565639
OOBZ01015437
338149
Bacillota
CTC
Glu
>WENV183566007
OOBZ01080166
144766
Bacillota
CAT
Met
>WENV183565275
OOBZ01004347
245298
Bacillota
CGG
Pro
>WENV183565313
OOBZ01005097
245298
Bacillota
CGG
Pro
>WENV183564814
OOBZ01000433
37269
Bacillota
TGA
Ser
>WENV183565766
OOBZ01025996
37269
Bacillota
TGA
Ser
>WENV183565194
OOBZ01002994
287000
Bacillota
GTT
Asn
>WENV183565820
OOBZ01032386
162445
Bacillota
CAT
Met
>WENV183565653
OOBZ01016180
152492
Bacillota
GGG
Pro
>WENV183564710
OOBZ01000182
235078
Bacillota
TAC
Val
>WENV183565880
OOBZ01040578
153911
Bacillota
GAT
Ile
>WENV183565366
OOBZ01005920
100326
Bacillota
GTA
Tyr
>WENV183565084
OOBZ01001816
411547
Bacillota
CTG
Gln
>WENV183565274
OOBZ01004347
411547
Bacillota
CTG
Gln
>WENV183565312
OOBZ01005097
411547
Bacillota
CTG
Gln
>WENV183565425
OOBZ01007718
411547
Bacillota
CTG
Gln
>WENV183564991
OOBZ01001241
411547
Bacillota
CTG
Gln
>WENV183565488
OOBZ01009275
147684
Bacillota
ACG
Arg
>WENV183564801
OOBZ01000364
4624
Bacillota
GCT
Ser
>WENV183565055
OOBZ01001665
263765
Bacillota
TAC
Val
>WENV183565433
OOBZ01008100
263765
Bacillota
TAC
Val
>WENV183565859
OOBZ01037494
412387
Bacillota
GCA
Cys
>WENV183566025
OOBZ01088596
411584
Bacillota
TCC
Gly
>WENV183565343
OOBZ01005453
235095
Bacillota
GGT
Thr
>WENV183565345
OOBZ01005453
235095
Bacillota
GGT
Thr
>WENV183565363
OOBZ01005885
235095
Bacillota
GGT
Thr
>WENV183565423
OOBZ01007668
235095
Bacillota
GGT
Thr
>WENV183565447
OOBZ01008365
235095
Bacillota
GGT
Thr
>WENV183565573
OOBZ01012168
235095
Bacillota
GGT
Thr
>WENV183564683
OOBZ01000139
419639
Bacillota
GCA
Cys
>WENV183565445
OOBZ01008326
411549
Bacillota
TTG
Gln
>WENV183565121
OOBZ01002151
148188
Bacillota
CCG
Arg
>WENV183565710
OOBZ01021211
148188
Bacillota
CCG
Arg
>WENV183565377
OOBZ01006449
235127
Bacillota
TTT
Lys
>WENV183565619
OOBZ01013881
235124
Bacillota
TGG
Pro
>WENV183565674
OOBZ01017744
235124
Bacillota
TGG
Pro
>WENV183565323
OOBZ01005267
338129
Bacillota
TGT
Thr
>WENV183564763
OOBZ01000293
292519
Bacillota
CAT
Met
>WENV183564767
OOBZ01000293
292519
Bacillota
CAT
Met
>WENV183565924
OOBZ01050471
419877
Bacillota
TCC
Gly
>WENV183565421
OOBZ01007668
235171
Bacillota
CCA
Trp
>WENV183564876
OOBZ01000633
238974
Bacillota
GAA
Phe
>WENV183565196
OOBZ01003000
144621
Bacillota
GTT
Asn
>WENV183564764
OOBZ01000293
243098
Bacillota
GGT
Thr
>WENV183564768
OOBZ01000293
243098
Bacillota
GGT
Thr
>WENV183565029
OOBZ01001457
58712
Bacillota
CAG
Leu
>WENV183565487
OOBZ01009231
58712
Bacillota
CAG
Leu
>WENV183565015
OOBZ01001356
245296
Bacillota
CCC
Gly
>WENV183565077
OOBZ01001767
245296
Bacillota
CCC
Gly
>WENV183565416
OOBZ01007558
245296
Bacillota
CCC
Gly
>WENV183565227
OOBZ01003496
272992
Bacillota
CTT
Lys
>WENV183564682
OOBZ01000139
344240
Bacillota
GCC
Gly
>WENV183564851
OOBZ01000543
344240
Bacillota
GCC
Gly
>WENV183565901
OOBZ01045881
198135
Bacillota
GAT
Ile
>WENV183564680
OOBZ01000139
196632
Bacillota
GTC
Asp
>WENV183564749
OOBZ01000275
196632
Bacillota
GTC
Asp
>WENV183564687
OOBZ01000139
178024
Bacillota
TCT
Arg
>WENV183565929
OOBZ01051904
299139
Bacillota
TGC
Ala
>WENV183565273
OOBZ01004332
144594
Bacillota
CAC
Val
>WENV183565354
OOBZ01005675
144594
Bacillota
CAC
Val
>WENV183565747
OOBZ01024382
144594
Bacillota
CAC
Val
>WENV183564560
OOBZ01000002
338127
Bacillota
TTG
Gln
>WENV183564681
OOBZ01000139
245344
Bacillota
GAA
Phe
>WENV183564750
OOBZ01000275
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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