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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
107 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183570756
OOCD01008525
155958
Bacillota
GAT
Ile
>WENV183570291
OOCD01000385
144612
Bacillota
TCT
Arg
>WENV183570483
OOCD01001666
144612
Bacillota
TCT
Arg
>WENV183571039
OOCD01041178
235287
Bacillota
TTT
Lys
>WENV183570315
OOCD01000482
235098
Bacillota
GAC
Val
>WENV183570768
OOCD01008890
235098
Bacillota
GAC
Val
>WENV183570460
OOCD01001529
340263
Bacillota
TTC
Glu
>WENV183570910
OOCD01020715
148239
Bacillota
TCT
Arg
>WENV183570340
OOCD01000620
44854
Bacillota
TGA
Ser
>WENV183570644
OOCD01004386
44854
Bacillota
TGA
Ser
>WENV183570462
OOCD01001529
148348
Bacillota
GTC
Asp
>WENV183570125
OOCD01000072
37071
Bacillota
TGA
Ser
>WENV183570826
OOCD01013342
429443
Bacillota
GCA
Cys
>WENV183571088
OOCD01053668
246023
Bacillota
TGC
Ala
>WENV183570065
OOCD01000014
59312
Bacillota
CAG
Leu
>WENV183570139
OOCD01000098
59312
Bacillota
CAG
Leu
>WENV183570432
OOCD01001313
239080
Bacillota
CTG
Gln
>WENV183570501
OOCD01001839
238910
Bacillota
CTT
Lys
>WENV183570052
OOCD01000004
338147
Bacillota
CTC
Glu
>WENV183570077
OOCD01000032
338147
Bacillota
CTC
Glu
>WENV183570164
OOCD01000139
338147
Bacillota
CTC
Glu
>WENV183571034
OOCD01039936
235150
Bacillota
TGC
Ala
>WENV183570649
OOCD01004515
155273
Bacillota
CAT
Met
>WENV183571046
OOCD01041178
338208
Bacillota
>WENV183570092
OOCD01000038
235114
Bacillota
TTT
Lys
>WENV183570251
OOCD01000273
235114
Bacillota
TTT
Lys
>WENV183571045
OOCD01041178
116350
Bacillota
TAG
Leu
>WENV183570183
OOCD01000163
429429
Bacillota
CCA
Trp
>WENV183571040
OOCD01041178
379268
Bacillota
TTC
Glu
>WENV183570063
OOCD01000014
44859
Bacillota
AAG
Leu
>WENV183570064
OOCD01000014
44859
Bacillota
AAG
Leu
>WENV183570314
OOCD01000480
11034
Bacillota
GGA
Ser
>WENV183570463
OOCD01001529
239076
Bacillota
GAA
Phe
>WENV183570911
OOCD01020715
156937
Bacillota
GTG
His
>WENV183571038
OOCD01041178
235290
Bacillota
TTG
Gln
>WENV183571071
OOCD01048341
235079
Bacillota
GAA
Phe
>WENV183570286
OOCD01000376
295714
Bacillota
GCC
Gly
>WENV183570287
OOCD01000376
295714
Bacillota
GCC
Gly
>WENV183570587
OOCD01003182
340265
Bacillota
GCC
Gly
>WENV183570346
OOCD01000647
338149
Bacillota
CTC
Glu
>WENV183570511
OOCD01002006
245298
Bacillota
CGG
Pro
>WENV183570562
OOCD01002764
245298
Bacillota
CGG
Pro
>WENV183571043
OOCD01041178
380750
Bacillota
TGT
Thr
>WENV183570076
OOCD01000031
155089
Bacillota
CAT
Met
>WENV183570403
OOCD01001077
169968
Bacillota
CAT
Met
>WENV183570260
OOCD01000284
162445
Bacillota
CAT
Met
>WENV183571087
OOCD01053668
201704
Bacillota
GAT
Ile
>WENV183570199
OOCD01000186
235078
Bacillota
TAC
Val
>WENV183570810
OOCD01012528
235078
Bacillota
TAC
Val
>WENV183571103
OOCD01059811
153911
Bacillota
GAT
Ile
>WENV183570100
OOCD01000046
100326
Bacillota
GTA
Tyr
>WENV183570090
OOCD01000038
144610
Bacillota
GTG
His
>WENV183570202
OOCD01000186
240017
Bacillota
GCC
Gly
>WENV183570813
OOCD01012528
240017
Bacillota
GCC
Gly
>WENV183570309
OOCD01000471
411547
Bacillota
CTG
Gln
>WENV183570321
OOCD01000509
411547
Bacillota
CTG
Gln
>WENV183570510
OOCD01002006
411547
Bacillota
CTG
Gln
>WENV183570561
OOCD01002764
411547
Bacillota
CTG
Gln
>WENV183570914
OOCD01020870
147684
Bacillota
ACG
Arg
>WENV183570341
OOCD01000620
4624
Bacillota
GCT
Ser
>WENV183570645
OOCD01004386
4624
Bacillota
GCT
Ser
>WENV183570427
OOCD01001270
235095
Bacillota
GGT
Thr
>WENV183570886
OOCD01017353
419639
Bacillota
GCA
Cys
>WENV183570461
OOCD01001529
239079
Bacillota
TAC
Val
>WENV183570278
OOCD01000348
411549
Bacillota
TTG
Gln
>WENV183570557
OOCD01002643
411549
Bacillota
TTG
Gln
>WENV183570203
OOCD01000188
235142
Bacillota
CTT
Lys
>WENV183570364
OOCD01000734
235142
Bacillota
CTT
Lys
>WENV183570481
OOCD01001665
148188
Bacillota
CCG
Arg
>WENV183570823
OOCD01013220
148188
Bacillota
CCG
Arg
>WENV183570120
OOCD01000068
256380
Bacillota
>WENV183570520
OOCD01002068
235124
Bacillota
TGG
Pro
>WENV183570640
OOCD01004280
235124
Bacillota
TGG
Pro
>WENV183570731
OOCD01007266
235124
Bacillota
TGG
Pro
>WENV183571060
OOCD01044898
163753
Bacillota
TGG
Pro
>WENV183570687
OOCD01005487
157838
Bacillota
GTC
Asp
>WENV183570306
OOCD01000438
144583
Bacillota
ACG
Arg
>WENV183570963
OOCD01028256
247734
Bacillota
TGC
Ala
>WENV183571101
OOCD01059809
235171
Bacillota
CCA
Trp
>WENV183570067
OOCD01000020
238974
Bacillota
GAA
Phe
>WENV183570347
OOCD01000647
144621
Bacillota
GTT
Asn
>WENV183570373
OOCD01000782
144621
Bacillota
GTT
Asn
>WENV183570509
OOCD01002001
144621
Bacillota
GTT
Asn
>WENV183570250
OOCD01000273
235113
Bacillota
GAA
Phe
>WENV183570161
OOCD01000132
58712
Bacillota
CAG
Leu
>WENV183570755
OOCD01008458
58712
Bacillota
CAG
Leu
>WENV183571037
OOCD01041178
144762
Bacillota
TCT
Arg
>WENV183570343
OOCD01000631
245296
Bacillota
CCC
Gly
>WENV183570527
OOCD01002199
245296
Bacillota
CCC
Gly
>WENV183570592
OOCD01003334
245296
Bacillota
CCC
Gly
>WENV183570803
OOCD01012048
272992
Bacillota
CTT
Lys
>WENV183570459
OOCD01001529
239078
Bacillota
TTT
Lys
>WENV183570885
OOCD01017353
344240
Bacillota
GCC
Gly
>WENV183570883
OOCD01017353
196632
Bacillota
GTC
Asp
>WENV183570487
OOCD01001687
144594
Bacillota
CAC
Val
>WENV183570545
OOCD01002481
144594
Bacillota
CAC
Val
>WENV183570162
OOCD01000134
95563
Bacillota
GTA
Tyr
>WENV183570248
OOCD01000273
95563
Bacillota
GTA
Tyr
>WENV183570283
OOCD01000368
414486
Bacillota
CCC
Gly
>WENV183570404
OOCD01001077
272488
Bacillota
GAA
Phe
>WENV183570093
OOCD01000038
114075
Bacillota
TAG
Leu
>WENV183570951
OOCD01026151
292012
Bacillota
TGC
Ala
>WENV183570170
OOCD01000144
338128
Bacillota
TTC
Glu
>WENV183570172
OOCD01000144
338128
Bacillota
TTC
Glu
>WENV183570388
OOCD01000935
338128
Bacillota
TTC
Glu
>WENV183570492
OOCD01001765
338128
Bacillota
TTC
Glu
>WENV183570884
OOCD01017353
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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