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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
118 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183571199
OOCE01000074
196621
Bacillota
GTC
Asp
>WENV183571385
OOCE01001662
196621
Bacillota
GTC
Asp
>WENV183571674
OOCE01029217
196621
Bacillota
GTC
Asp
>WENV183571162
OOCE01000012
309417
Bacillota
GGC
Ala
>WENV183571284
OOCE01000512
309417
Bacillota
GGC
Ala
>WENV183571441
OOCE01002614
309417
Bacillota
GGC
Ala
>WENV183571464
OOCE01003687
309417
Bacillota
GGC
Ala
>WENV183571583
OOCE01012365
309417
Bacillota
GGC
Ala
>WENV183571711
OOCE01037439
409574
Bacillota
TGT
Thr
>WENV183571176
OOCE01000022
144612
Bacillota
TCT
Arg
>WENV183571233
OOCE01000186
144612
Bacillota
TCT
Arg
>WENV183571275
OOCE01000457
144612
Bacillota
TCT
Arg
>WENV183571414
OOCE01002135
144612
Bacillota
TCT
Arg
>WENV183571516
OOCE01006629
144612
Bacillota
TCT
Arg
>WENV183571652
OOCE01022611
144612
Bacillota
TCT
Arg
>WENV183571529
OOCE01007187
235134
Bacillota
GAA
Phe
>WENV183571712
OOCE01037439
235287
Bacillota
TTT
Lys
>WENV183571323
OOCE01000900
235098
Bacillota
GAC
Val
>WENV183571358
OOCE01001287
235098
Bacillota
GAC
Val
>WENV183571553
OOCE01009434
235098
Bacillota
GAC
Val
>WENV183571620
OOCE01019423
235098
Bacillota
GAC
Val
>WENV183571750
OOCE01046850
235098
Bacillota
GAC
Val
>WENV183571149
OOCE01000004
44854
Bacillota
TGA
Ser
>WENV183571416
OOCE01002154
44854
Bacillota
TGA
Ser
>WENV183571673
OOCE01029059
144577
Bacillota
GAT
Ile
>WENV183571738
OOCE01042137
37071
Bacillota
TGA
Ser
>WENV183571197
OOCE01000074
304022
Bacillota
GCC
Gly
>WENV183571201
OOCE01000074
304022
Bacillota
GCC
Gly
>WENV183571316
OOCE01000833
304022
Bacillota
GCC
Gly
>WENV183571364
OOCE01001420
304022
Bacillota
GCC
Gly
>WENV183571376
OOCE01001581
304022
Bacillota
GCC
Gly
>WENV183571390
OOCE01001735
304022
Bacillota
GCC
Gly
>WENV183571433
OOCE01002436
304022
Bacillota
GCC
Gly
>WENV183571439
OOCE01002587
304022
Bacillota
GCC
Gly
>WENV183571500
OOCE01005539
304022
Bacillota
GCC
Gly
>WENV183571520
OOCE01006827
304022
Bacillota
GCC
Gly
>WENV183571600
OOCE01015319
304022
Bacillota
GCC
Gly
>WENV183571607
OOCE01017242
304022
Bacillota
GCC
Gly
>WENV183571654
OOCE01022783
304022
Bacillota
GCC
Gly
>WENV183571767
OOCE01052734
302150
Bacillota
TAC
Val
>WENV183571566
OOCE01010974
307003
Bacillota
TGC
Ala
>WENV183571743
OOCE01043328
59312
Bacillota
CAG
Leu
>WENV183571685
OOCE01032320
235150
Bacillota
TGC
Ala
>WENV183571731
OOCE01040677
144668
Bacillota
GTC
Asp
>WENV183571755
OOCE01049143
144668
Bacillota
GTC
Asp
>WENV183571707
OOCE01037439
379268
Bacillota
TTC
Glu
>WENV183571732
OOCE01040677
41154
Bacillota
TAA
Leu
>WENV183571716
OOCE01037955
44859
Bacillota
AAG
Leu
>WENV183571260
OOCE01000322
11034
Bacillota
GGA
Ser
>WENV183571547
OOCE01008476
11034
Bacillota
GGA
Ser
>WENV183571198
OOCE01000074
235117
Bacillota
TAC
Val
>WENV183571377
OOCE01001581
235117
Bacillota
TAC
Val
>WENV183571440
OOCE01002587
235117
Bacillota
TAC
Val
>WENV183571661
OOCE01023921
247057
Bacillota
TGC
Ala
>WENV183571200
OOCE01000074
235079
Bacillota
GAA
Phe
>WENV183571499
OOCE01005539
235079
Bacillota
GAA
Phe
>WENV183571672
OOCE01029059
235087
Bacillota
TGC
Ala
>WENV183571332
OOCE01001093
338149
Bacillota
CTC
Glu
>WENV183571459
OOCE01003512
338149
Bacillota
CTC
Glu
>WENV183571507
OOCE01005878
338149
Bacillota
CTC
Glu
>WENV183571584
OOCE01012405
338149
Bacillota
CTC
Glu
>WENV183571667
OOCE01026636
338149
Bacillota
CTC
Glu
>WENV183571262
OOCE01000336
245298
Bacillota
CGG
Pro
>WENV183571486
OOCE01004838
245298
Bacillota
CGG
Pro
>WENV183571766
OOCE01052734
144599
Bacillota
GTC
Asp
>WENV183571530
OOCE01007187
240017
Bacillota
GCC
Gly
>WENV183571223
OOCE01000114
411547
Bacillota
CTG
Gln
>WENV183571238
OOCE01000198
411547
Bacillota
CTG
Gln
>WENV183571261
OOCE01000336
411547
Bacillota
CTG
Gln
>WENV183571351
OOCE01001203
411547
Bacillota
CTG
Gln
>WENV183571150
OOCE01000004
4624
Bacillota
GCT
Ser
>WENV183571417
OOCE01002154
4624
Bacillota
GCT
Ser
>WENV183571527
OOCE01007187
263765
Bacillota
TAC
Val
>WENV183571708
OOCE01037439
411584
Bacillota
TCC
Gly
>WENV183571709
OOCE01037439
313104
Bacillota
TAC
Val
>WENV183571691
OOCE01033564
313164
Bacillota
TTT
Lys
>WENV183571215
OOCE01000098
235095
Bacillota
GGT
Thr
>WENV183571386
OOCE01001662
235095
Bacillota
GGT
Thr
>WENV183571554
OOCE01009646
235095
Bacillota
GGT
Thr
>WENV183571675
OOCE01029217
235095
Bacillota
GGT
Thr
>WENV183571263
OOCE01000336
411549
Bacillota
TTG
Gln
>WENV183571272
OOCE01000387
411549
Bacillota
TTG
Gln
>WENV183571330
OOCE01000995
411549
Bacillota
TTG
Gln
>WENV183571479
OOCE01004349
411549
Bacillota
TTG
Gln
>WENV183571412
OOCE01002122
148188
Bacillota
CCG
Arg
>WENV183571666
OOCE01026593
148188
Bacillota
CCG
Arg
>WENV183571393
OOCE01001813
148188
Bacillota
CCG
Arg
>WENV183571571
OOCE01011438
80612
Bacillota
GTA
Tyr
>WENV183571581
OOCE01012200
80612
Bacillota
GTA
Tyr
>WENV183571688
OOCE01033564
147674
Bacillota
TCT
Arg
>WENV183571239
OOCE01000208
235124
Bacillota
TGG
Pro
>WENV183571410
OOCE01002101
235124
Bacillota
TGG
Pro
>WENV183571482
OOCE01004477
235124
Bacillota
TGG
Pro
>WENV183571167
OOCE01000015
338129
Bacillota
TGT
Thr
>WENV183571352
OOCE01001204
338129
Bacillota
TGT
Thr
>WENV183571550
OOCE01009152
338129
Bacillota
TGT
Thr
>WENV183571218
OOCE01000104
144583
Bacillota
ACG
Arg
>WENV183571373
OOCE01001527
144583
Bacillota
ACG
Arg
>WENV183571418
OOCE01002160
247734
Bacillota
TGC
Ala
>WENV183571235
OOCE01000192
235171
Bacillota
CCA
Trp
>WENV183571333
OOCE01001093
144621
Bacillota
GTT
Asn
>WENV183571460
OOCE01003512
144621
Bacillota
GTT
Asn
>WENV183571508
OOCE01005878
144621
Bacillota
GTT
Asn
>WENV183571170
OOCE01000018
58712
Bacillota
CAG
Leu
>WENV183571322
OOCE01000869
58712
Bacillota
CAG
Leu
>WENV183571188
OOCE01000045
245296
Bacillota
CCC
Gly
>WENV183571292
OOCE01000690
245296
Bacillota
CCC
Gly
>WENV183571329
OOCE01000981
245296
Bacillota
CCC
Gly
>WENV183571582
OOCE01012363
272992
Bacillota
CTT
Lys
>WENV183571668
OOCE01026636
272992
Bacillota
CTT
Lys
>WENV183571717
OOCE01038028
299139
Bacillota
TGC
Ala
>WENV183571356
OOCE01001272
144594
Bacillota
CAC
Val
>WENV183571588
OOCE01012711
144594
Bacillota
CAC
Val
>WENV183571592
OOCE01013970
144594
Bacillota
CAC
Val
>WENV183571612
OOCE01018660
144594
Bacillota
CAC
Val
>WENV183571579
OOCE01011857
95563
Bacillota
GTA
Tyr
>WENV183571706
OOCE01037384
272488
Bacillota
GAA
Phe
>WENV183571175
OOCE01000021
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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