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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183587336
OOCU01000064
235146
Actinomycetota
CGT
Thr
>WENV183587542
OOCU01000330
235347
Actinomycetota
GGC
Ala
>WENV183587543
OOCU01000330
235347
Actinomycetota
GGC
Ala
>WENV183587406
OOCU01000131
3239
Actinomycetota
GCT
Ser
>WENV183587923
OOCU01005886
37070
Actinomycetota
CGA
Ser
>WENV183587338
OOCU01000064
201717
Actinomycetota
CTT
Lys
>WENV183587544
OOCU01000330
144600
Actinomycetota
TGG
Pro
>WENV183587478
OOCU01000233
235194
Actinomycetota
GTG
His
>WENV183587334
OOCU01000064
273786
Actinomycetota
CGT
Thr
>WENV183587474
OOCU01000229
158720
Actinomycetota
ACG
Arg
>WENV183587475
OOCU01000229
158720
Actinomycetota
ACG
Arg
>WENV183587933
OOCU01007131
245301
Actinomycetota
GCC
Gly
>WENV183587701
OOCU01000859
411601
Actinomycetota
CCC
Gly
>WENV183587437
OOCU01000179
144826
Actinomycetota
GGG
Pro
>WENV183587388
OOCU01000107
23370
Actinomycetota
GCT
Ser
>WENV183587329
OOCU01000059
174149
Actinomycetota
GAT
Ile
>WENV183587315
OOCU01000049
338239
Actinomycetota
TTC
Glu
>WENV183587330
OOCU01000059
235174
Actinomycetota
TGC
Ala
>WENV183587832
OOCU01002758
235101
Actinomycetota
TTT
Lys
>WENV183587536
OOCU01000323
121510
Actinomycetota
TAA
Leu
>WENV183587341
OOCU01000064
356045
Actinomycetota
GAC
Val
>WENV183587434
OOCU01000179
356045
Actinomycetota
GAC
Val
>WENV183588016
OOCU01018897
145423
Actinomycetota
TCT
Arg
>WENV183587911
OOCU01005480
150473
Actinomycetota
CTC
Glu
>WENV183587317
OOCU01000049
44855
Actinomycetota
TGA
Ser
>WENV183587342
OOCU01000064
235199
Actinomycetota
CAC
Val
>WENV183587435
OOCU01000179
235199
Actinomycetota
CAC
Val
>WENV183587389
OOCU01000107
44862
Actinomycetota
CGA
Ser
>WENV183587541
OOCU01000330
413665
Actinomycetota
TTG
Gln
>WENV183587339
OOCU01000064
254857
Actinomycetota
CCG
Arg
>WENV183587387
OOCU01000107
144700
Actinomycetota
CAT
Met
>WENV183587932
OOCU01006971
144636
Actinomycetota
GAT
Ile
>WENV183587350
OOCU01000076
295695
Actinomycetota
CTC
Glu
>WENV183588018
OOCU01019101
98279
Actinomycetota
GTA
Tyr
>WENV183587351
OOCU01000076
338148
Actinomycetota
CTG
Gln
>WENV183587415
OOCU01000146
235148
Actinomycetota
GTT
Asn
>WENV183587417
OOCU01000146
235148
Actinomycetota
GTT
Asn
>WENV183587353
OOCU01000076
53078
Actinomycetota
GGA
Ser
>WENV183587407
OOCU01000131
338238
Actinomycetota
CCA
Trp
>WENV183587320
OOCU01000049
144825
Actinomycetota
CAT
Met
>WENV183587817
OOCU01002377
338139
Actinomycetota
GTT
Asn
>WENV183587321
OOCU01000049
235348
Actinomycetota
CCT
Arg
>WENV183587877
OOCU01004199
411554
Actinomycetota
CCC
Gly
>WENV183587335
OOCU01000064
113601
Actinomycetota
TAG
Leu
>WENV183587537
OOCU01000323
144595
Actinomycetota
CAA
Leu
>WENV183587810
OOCU01002082
61501
Actinomycetota
CAG
Leu
>WENV183587401
OOCU01000128
16222
Actinomycetota
GAG
Leu
>WENV183587915
OOCU01005791
158513
Actinomycetota
TGG
Pro
>WENV183587934
OOCU01007131
412834
Actinomycetota
GCA
Cys
>WENV183587416
OOCU01000146
243162
Actinomycetota
GTT
Asn
>WENV183587642
OOCU01000609
144660
Actinomycetota
TAC
Val
>WENV183587386
OOCU01000107
95593
Actinomycetota
>WENV183587479
OOCU01000233
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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